Nocardioides aquaticus: ENKNEFLB_01464
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Entry
ENKNEFLB_01464 CDS
T07580
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naqu03016
]
ENKNEFLB_01464 (truB)
Enzymes [BR:
naqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ENKNEFLB_01464 (truB)
Transfer RNA biogenesis [BR:
naqu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ENKNEFLB_01464 (truB)
Prokaryotic type
ENKNEFLB_01464 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QVT79084
LinkDB
All DBs
Position
1501156..1502070
Genome browser
AA seq
304 aa
AA seq
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MSTPRPEPVPGLVVVDKPGGMTSHDVVSRVRRLAGTRKVGHAGTLDPMATGVLVLGVGRA
TRLLGHLVLTEKTYEATIRLGAATTTDDAEGEAVPAEDPAARAAAVAALDPERVRAALAA
QVGERDQVPSTVSAIKVDGRRAHARVRAGEEVVLEPRRVTIHAIDVHDVAAVAAPEGARV
DVVVTVRCSSGTYVRAVARDLGDDLGVGGHLTALRRTRVGPFGLAEARTLEELTETYDVL
APGDAARLAFPVLELGEDAERDVRVGRPLDVQLDGLTALLDAAGGLLALYEPREGRARPV
AVLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccccggcccgagcccgtcccgggcctggtcgtggtggacaagccgggcggg
atgaccagccacgacgtggtctcccgcgtacgccggctggccgggacccgcaaggtcggt
cacgccggcaccctcgacccgatggcgaccggggtgctggtgctcggcgtcgggcgcgcc
acccggctgctcggccacctcgtgctgaccgagaagacctacgaggcgacgatccggctc
ggcgctgccaccacgaccgacgacgccgagggcgaggcggtgcctgccgaggaccccgcg
gcccgggcggcggccgtcgcggcgctcgaccccgagcgggtgcgggcggcgctcgcggcg
caggtgggggagcgcgaccaggtccccagcaccgtctcggcgatcaaggtcgacggccgc
cgggcccacgcccgggtgcgcgccggggaggaggtcgtcctcgagccgcgtcgggtgacg
atccacgcgatcgacgtgcacgacgtcgccgccgtcgcggcgcccgagggcgcccgcgtc
gacgtcgtcgtgaccgtccgctgctccagcggcacctacgtccgcgccgtcgcccgcgac
ctcggcgacgacctgggggtcggtggtcacctcaccgcgctgcggcgcacccgggtcggg
ccgttcgggctcgcggaggcccgcacgctcgaggagctcaccgagacctacgacgtcctg
gcccccggcgacgccgcgcggctcgccttcccggtgctcgagctgggggaggacgccgag
cgcgacgtgcgcgtggggcgtccgctggacgtccagctcgacggcctgaccgcgctgctc
gacgccgccggggggctgttggcgctctacgagccgcgcgagggccgggcccgcccggtg
gccgtcctcgtctga
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integrated database retrieval system
