Nocardioides aquaticus: ENKNEFLB_01842
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Entry
ENKNEFLB_01842 CDS
T07580
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
naqu
Nocardioides aquaticus
Pathway
naqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ENKNEFLB_01842 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naqu03021
]
ENKNEFLB_01842 (rho)
03019 Messenger RNA biogenesis [BR:
naqu03019
]
ENKNEFLB_01842 (rho)
Transcription machinery [BR:
naqu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ENKNEFLB_01842 (rho)
Messenger RNA biogenesis [BR:
naqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ENKNEFLB_01842 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_22
Spore_III_AA
ATPase_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QVT79460
UniProt:
A0ABX8EHT0
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All DBs
Position
1899510..1900664
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AA seq
384 aa
AA seq
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MLVPAAGILDVLDNYAFVRTTGYLAGTEDVYLSLSMVRRHGLRRGDAVVGEVRQPREGER
KEKFNPMVRVESINGLDLDAAKVRPDFADLTPVHPSERLRLETGPGNTVGRVLDLVAPLG
KGQRGLVVAPPQSGRTTLLRAVADSVTQNNPECHLMVVLVDERPEEVTDFQRAVKGEVIA
STFDRPATDHVALAELAVERAKRLVELGHDVVMLVDGLTRLGRAYNAAGPGSGRVLAGGV
DAAALFPPKRFFAAARNVEGGGSLTILATASVETGSATDEVLFEELGGTANLELHLRRDL
AERHLTPSVDPLRSRTRREDELMGEQELTVLGTLRGLLAQQEAPRALELLVERVRATQTN
IELLTAVQRTGSLGRPTSRAAVAK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgcccgcggccgggatcctcgacgtcctcgacaactacgcgttcgtgcggacc
accggctacctggccggcaccgaggacgtctacctgtcgctgtcgatggtgcgccgccac
ggcctgcgtcgcggtgacgcggtcgtcggcgaggtgcgccagccccgggagggcgagcgc
aaggagaagttcaacccgatggtgcgggtggagagcatcaacgggctcgacctcgacgcc
gccaaggtgcgtcccgacttcgccgacctcaccccggtgcacccgtccgagaggctgcgc
ctggagacgggcccgggcaacacggtgggccgcgtgctcgacctcgtcgcgcccctcggc
aagggccagcgcggcctcgtcgtcgccccgccccagtcgggccgtacgacgctgctgcgt
gcggtggcggactcggtgacccagaacaaccccgagtgccacctcatggtggtgctcgtc
gacgagcggcccgaggaggtcacggacttccagcgtgcggtgaagggcgaggtcatcgcc
tccacgttcgaccgcccggccaccgaccacgtggccctggccgagctggccgtcgagcgg
gccaagcgcctggtcgagctgggccacgacgtggtgatgctggtcgacggcctgacccgg
ctcgggcgcgcgtacaacgccgccgggcccggcagcggccgggtgctggcgggcggcgtc
gacgccgcggccctcttcccgcccaagcggttcttcgcggcggcccgcaacgtcgagggc
ggcggctcgctgacgatcctggccacggcctcggtggagaccggctcggcgaccgacgag
gtgctcttcgaggagctgggcggcacggccaacctcgagctgcacctgcggcgtgacctg
gccgagcggcacctcacgccgtccgtcgacccgctgcgctcgcgcacccgccgcgaggac
gagctgatgggggagcaggagctcacggtgctcggcaccctgcgtggcctgctcgcccag
caggaggcgccccgcgccctggagctgctggtggagcgggtgcgcgcgacccagaccaac
atcgagctgctcaccgcggtgcagcgcaccgggtccctcgggcgcccgacctcccgcgcg
gcggtggccaagtga
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