Nocardioides aquaticus: ENKNEFLB_02279
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Entry
ENKNEFLB_02279 CDS
T07580
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_02279 (sbcC)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ENKNEFLB_02279 (sbcC)
Archaeal homologous recombinant proteins
ENKNEFLB_02279 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_15
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QVT79889
LinkDB
All DBs
Position
complement(2345001..2348159)
Genome browser
AA seq
1052 aa
AA seq
DB search
MRLHELEVAAFGPFTDAVTVDLDALAEGGLFLLSGPTGAGKTSVLDAVCFALYGEVPGDR
AAARRLRSDQAAEGAEPRVRLVATLAGRRFELTRTPAWQRPKKRGTGTTPQQASVRVRER
VDGSWTTLTTRLDEAGHLVTTLLGMNLAQFTQVAMLPQGRFQAFLRADSDERQKLLQRLF
GTARFERAEAWLRERRSDARREHDRAHLDLSGTLGRVAEVADTDLPPWDLDDLAGPARTG
EVTGWAHGLAQAADDDRARLDAGLDEVAAREHEARTALEAARVEAERLARRAAAAAELDV
LHARTVEHDEDVRRLEAARRAAPVAPLRTRLTAALGQQQRAEVDRTAAWAEAEDLLGPAP
VVVAQPEDEADEPTLFDLPDTQEAENEPRWSRSERSERLETSTAQDDADLAWMRDQADAA
LADATAVDAARPLEARAREVAGALVSVREEVSRRTAQVTDLVDACAGAPAELAALRSQAA
GAQQAAVRAEAERRTVRELEARSAAARDADRVLALLGPARQRHADARDEVLAAREVLLEL
RECRIAGMAAELATGLAVGASCPVCGSAEHPTKASPAPGSPDATAERRAQHDVDQANAVA
HLRDEEARDLESRLAAARARAGDDETDDLLARTEQARAACAALEAEAAGLERHHRDLDRV
EQEQDARQLALTEARAALVRAEERRTSLEEQSTALDAELATVRGTHPDLDTAERHHLDRV
GTARRAVRAAEALAAARSHVIAAAADLAAAAAEAGFGSPDDARDATLPGADVESLDARVR
RHRERLSAVTAVLRDTDPARTAPDSTDSADSTGPAGPPDLPALEAAHRAALDRLGDHRGR
QRQVAHRAARLGELDTEVAAAVARWTPLRDELDLVSRLSTFAEGRSADNRWQIRFSAYVL
AYRLSQVVAAANVRLARMSDQRYALEHTADRGRDRRGGLGLLVRDDWSGLSRNPSTLSGG
ETFVVSLALALGLSDVITAEAGGVELDTLFVDEGFGSLDADTLDDVMDTLDALRDGGRVV
GVVSHVAEMRDRIPVQLRVTKARTGSRLAIHR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcacgagctggaggtcgcggccttcggcccgttcaccgacgccgtcaccgtc
gacctcgacgcgctggccgagggcgggctgttcctgctgtccgggccgaccggtgcgggc
aagaccagcgtcctggacgcggtctgcttcgcgctgtacggcgaggtccccggggaccgt
gcagccgcccgccggctgcgctccgaccaggccgccgagggagccgagccgcgcgtacgc
ctggtcgccacgctggccggacgccgcttcgagctgacccgcaccccggcctggcagcga
ccgaagaagcgcggcaccggcaccacgccacaacaggccagcgtccgggtccgcgagcgc
gtggacgggtcctggaccacgctcaccacccggctcgacgaggccgggcacctggtcacg
acgctgctggggatgaacctggcccagttcacgcaggtcgcgatgctgccgcagggcagg
ttccaggcgttcctgcgcgccgactccgacgagcggcagaagctgctccagcgtctcttc
ggcaccgcccgcttcgagcgggccgaggcgtggctgcgcgagcgccgcagcgacgcccgt
cgtgagcacgaccgcgcccacctcgacctctccggcaccctcggccgcgtcgccgaggtc
gccgacaccgacctgccgccgtgggacctcgacgacctggccgggcccgcccgcaccggc
gaggtcaccggctgggcccacggtctcgcgcaggcggccgacgacgaccgcgcgcggctg
gacgccggcctggacgaggtcgctgcgcgcgagcacgaggcccgcacggcgctggaggct
gcccgggtcgaggccgagcggctggcccgccgtgcagccgcggcggccgagctcgacgtc
ctccacgcacggaccgtcgagcacgacgaggacgtgcgtcggctcgaggcggcccgccgc
gccgctcccgtcgcccccctgcgcacgcgtctgaccgccgcgctggggcagcaacagcgc
gccgaggtcgaccggaccgcggcgtgggccgaggccgaggacctgctcgggcccgcgccg
gtggtggtggcgcagccggaggacgaggccgacgagccgacgttgttcgacctcccggac
acgcaggaagcggagaacgagccccggtggtcgaggagcgagcgcagcgagcgtctcgag
acctccaccgcccaggacgacgccgacctcgcctggatgcgcgaccaggccgacgcggcg
ctcgccgacgccaccgcggtggacgccgcgcgccccctggaggcccgtgcgcgtgaggtc
gccggcgcgctggtctcggtgcgcgaggaggtcagccggcggaccgcccaggtcaccgac
ctggtcgacgcctgcgccggtgccccggccgagctggcggcgctgcgctcccaggccgcc
ggcgcccagcaggccgcggtccgcgcggaggccgagcgtcgtaccgtccgcgagctcgag
gcgcgcagcgccgcagcgcgcgacgccgaccgggtgctggccctgctcggccccgcccgg
cagcgtcacgccgacgcccgcgacgaggtcctcgcggcacgggaggtcctcctcgagctc
cgcgagtgccggatcgccgggatggccgccgagctcgcgaccggtctcgccgtcggggcg
agctgcccggtctgcggctccgccgagcaccccaccaaggccagccccgcccccgggtcg
cccgacgcgaccgccgagcgccgcgcgcagcacgacgtcgaccaggccaacgccgtggcg
cacctgcgcgacgaggaggcacgcgacctcgagagccggctggccgccgcccgggcccgc
gcgggcgacgacgagaccgacgacctcctcgcccggaccgagcaggcccgggcggcgtgc
gctgccctggaggccgaggccgccgggctcgagcggcaccaccgcgacctcgaccgcgtc
gagcaggagcaggacgcccgccagctcgcgctgaccgaggcccgcgccgccctggtccgg
gccgaggagcgccgcacctccctggaggagcagtcgaccgccctcgacgccgagctggcc
acggtccgcggcacgcaccccgacctcgacaccgccgagcggcaccacctcgaccgggtc
ggtacggcccgccgggccgtgcgcgccgccgaggcgctggccgcggcccgctcccacgtc
atcgcggccgccgccgacctcgccgccgcagccgcggaggccgggttcggctcgcccgac
gacgcccgcgacgccaccctccccggcgccgacgtcgagtccctcgacgcccgcgtccgt
cgacaccgggagcggctgagcgccgtcaccgcggtgctgcgcgacaccgaccccgcccgt
acggcccccgactccaccgactccgccgactccaccgggcccgccgggccgccggacctc
ccggcgctcgaggcggcccaccgcgccgccctggaccggctcggcgaccaccgcggccgg
cagcgccaggtcgcccaccgcgccgcccggctcggggagctcgacaccgaggtcgcagcc
gccgtggcccggtggacaccgctgcgcgacgagctcgacctggtgtcgcgcctgtccacc
ttcgccgagggacgcagcgccgacaatcgctggcagatccggttctccgcctacgtgctg
gcctaccggctcagccaggtcgtcgccgcagccaacgtgcggctggcccggatgagcgac
cagcgctacgctctcgagcacaccgccgaccgcggccgcgaccgtcgtggcggcctgggc
ctgctggtgcgcgacgactggtcggggctctcgcgcaacccctcgacgctctcgggcggc
gagaccttcgtggtctcgctggcgctggcgctcgggctgtccgacgtgatcacggccgag
gccggcggcgtcgagctggacacgctcttcgtcgacgaggggttcgggtcgctggacgcc
gacaccctcgacgacgtgatggacaccctcgacgcgctgcgcgacggcgggcgggtcgtc
ggcgtggtcagccacgtcgcggagatgcgcgaccggatcccggtccagctgcgcgtgacg
aaggcgcgcaccgggtcgcggctggcgatccaccggtga
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