Nocardioides aquaticus: ENKNEFLB_02942
Help
Entry
ENKNEFLB_02942 CDS
T07580
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
naqu03009
]
ENKNEFLB_02942 (rimO)
Enzymes [BR:
naqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ENKNEFLB_02942 (rimO)
Ribosome biogenesis [BR:
naqu03009
]
Prokaryotic type
ribosomal protein modification factors
ENKNEFLB_02942 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Ada3
Motif
Other DBs
NCBI-ProteinID:
QVT80543
UniProt:
A0ABX8ENB5
LinkDB
All DBs
Position
complement(3015335..3016780)
Genome browser
AA seq
481 aa
AA seq
DB search
MTTPTTAPAVAPAPPADEPELHAVAVVTLGCARNEVDSEELAGRLTQGGFRLVSDPADAD
SVLVNTCGFVEAAKKDSVDTLLQAADLKENGRPSTVVAVGCLAERYGADLADSLPEADAV
LGFDDYPDIAARLRGIVAGERPAAHVPADRRRLLPISPVDRAAEAPARVERTRLETGPLA
SLKLASGCDRRCTFCAIPSFRGSFVSRRPSDVLHDAQWLAGEGARELFLVSENSTSYGKD
LGDLRLLESLLPTLAATDGVERVRVSYLQPAETRPGLVEAIATTPGVAPYFDLSFQHASA
TVLRRMRRFGDPESFLGLLDQVRSHAPLAGIRSNVIVGFPGETEEDLETLTDFLVAARLD
VVGVFGYSDEDGTEAESFTDKHDEDEVAARLAHVTDLVEQLTAQRAEERLGEVVEVLVEH
VAVEDGEVVVEGRGAHQGPEVDGLCRVQGHPGDLRVGDLVTGTVVASEGADLVVTSAGTV
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcccaccaccgcccctgcggtcgcccctgccccgccggccgacgagcccgag
ctgcacgccgtcgccgtggtgaccctcggctgcgcgcgcaacgaggtcgactccgaggag
ctcgccggccgcctgacgcagggcgggttccgcctggtctccgacccggccgacgccgac
agcgtcctggtcaacacctgcgggttcgtcgaggccgcgaagaaggactcggtcgacacc
ctgctgcaggccgcggacctgaaggagaacggccgcccgagcaccgtcgtggcggtcggc
tgcctggccgagcggtacggcgccgacctcgccgactccctgcccgaggccgacgcggtc
ctcggcttcgacgactaccccgacatcgccgcccgcctgcgcgggatcgtggcgggggag
cggccggccgcgcacgtcccggccgaccggcgccggctgctgccgatcagcccggtcgac
cgggccgccgaggcccctgcccgggtcgagcgcacccgcctcgagaccgggccgctggcc
tcgctgaagctggccagcggctgcgaccgccggtgcaccttctgcgcgatcccgtccttc
cgcggcagcttcgtgagccgccgccccagcgacgtcctgcacgacgcgcagtggctggcc
ggcgagggcgcccgcgagctcttcctggtctccgagaactccacctcctacggcaaggac
ctcggcgacctgcgcctgctcgagtcgctgctgccgacgctggccgccaccgacggcgtc
gagcgggtccgggtgtcgtacctgcagccggccgagacccgccccgggctggtcgaggcg
atcgcgaccacgccgggcgtcgcgccgtacttcgacctgtccttccagcacgccagcgcc
acggtcctgcgccggatgcgccgcttcggcgaccccgagtcgttcctcgggctgctcgac
caggtgcgctcgcacgcgccgctggccgggatccgctccaacgtgatcgtcggcttcccc
ggcgagaccgaggaggacctcgagacgctgaccgacttcctcgtcgccgcgcgcctcgat
gtcgtcggcgtcttcggctactccgacgaggacggcaccgaggccgagtccttcaccgac
aagcacgacgaggacgaggtcgccgcgaggctggcccacgtcaccgacctggtcgagcag
ctcacggcgcagcgcgccgaggagcgcctcggcgaggtggtcgaggtcctcgtcgagcac
gtcgccgtcgaggacggcgaggtcgtcgtcgagggccgcggtgcccaccagggtccggag
gtcgacggcctgtgccgcgtccagggccaccccggcgacctgcgcgtcggcgacctggtc
accggcacggtcgtggccagcgagggcgccgacctggtcgtgacctccgcggggacggtg
cgatga
DBGET
integrated database retrieval system
