Nocardioides aquaticus: ENKNEFLB_03104
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Entry
ENKNEFLB_03104 CDS
T07580
Symbol
gyrA_3
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naqu03032
]
ENKNEFLB_03104 (gyrA_3)
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_03104 (gyrA_3)
Enzymes [BR:
naqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ENKNEFLB_03104 (gyrA_3)
DNA replication proteins [BR:
naqu03032
]
Prokaryotic type
DNA Topoisomerases
ENKNEFLB_03104 (gyrA_3)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ENKNEFLB_03104 (gyrA_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
QVT80704
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Position
3180907..3183489
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AA seq
860 aa
AA seq
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MMRPMARRTPTPPPPDEVEEHVLDIDVGEEMRTSFLEYAYSVIYSRALPDARDGLKPVQR
RILYTMQQMNLTPERGHVKCARVVGEVMGRLHPHGDTAIYDALVRTAQPWSMRLPMVDGH
GNFGSPDDSPAAMRYTECRMDAPAVAMTASIDEDTVDFRPNYDSRELEPSVLPAAIPNLV
VNGTTGIAVGMATNMAPHNLVEVVQALRHLITHPAAGTEDLMRFVPGPDLPTGGKIVGLA
GIRDAYETGRGSFKMRATARVEPVGRRKGIVVTELPYGVGTEKVVERIKTLVQGKKLQGI
ADIKDLTDREHGLRLVIEVKNGFVPEAVLEQLYKSTPLEDSFGINAVALVDGQPRTLGLK
QMLEVFLAHRFEVVRRRSQFRRDRKADRLHLVDGLLVALLDIDEVIAVIRSSDDAGAARE
RLSTVFDLSRAQADYILEMQLRRLTRFSRIELEKEQEQLRREIEELDAILADDALLRGVV
SAELADVAATYGTPRRTVLLESAGAPAAAAAAGALEVADEPCLALLSSAGLLARTAPLDP
DAAGGGVSGAADGSDARRAHDVVVSSVRATTRGEVGVLTSAGRLHRLGVLDLPALPPSNS
HPDLQGGVPLTELLVLEPGERALALCSLAEDGPGLALGTRTGTVKRVNPEVLNRDAWEVV
RLADGDEVVGAVELTTGAEQLCFVSSGAQLLHFGADAVRPQGRTGGGVAGIKLGAGERVL
FFGVTDPAAPHGHEVLTVSGASTALPGTEVGAAKLTPFSEYPAKGRATGGVRCHRFLRGE
DTLLLAWVGPAPARAAAASGAPIELPAPTGRRDGSGVPLAQPVAACAGALGASPAALGAG
TGPLPDAGSEDGPATDGVGG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccccatggcccggcgcacccccacccctcccccgcccgacgaggtcgaggag
cacgtcctcgacatcgacgtcggtgaggagatgcgcacctcgttcctggagtacgcctac
tccgtcatctactcccgggcgctgcccgacgcccgggacggcctgaagccggtgcagcgc
cggatcctctacacgatgcagcagatgaacctgacccccgagcggggccacgtgaagtgc
gcccgcgtggtcggcgaggtgatgggccggctgcacccgcacggcgacaccgcgatctac
gacgccctcgtgcgcaccgcccagccgtggtcgatgcggctgccgatggtcgacgggcac
ggcaacttcggctcgccggacgactcgccggccgccatgcgctacaccgagtgccggatg
gatgcgcccgcggtggcgatgacggcctcaatcgacgaggacaccgtcgacttccggccc
aactacgacagccgcgagctcgagccgtcggtgctgccggccgccatcccgaacctcgtc
gtcaacggcaccaccggcatcgcggtcgggatggccaccaacatggccccccacaacctg
gtcgaggtcgtccaggcgctgcgccacctgatcacccacccagcggccggcaccgaggac
ctgatgcggttcgtgcccgggcccgacctgcccaccggcggcaagatcgtcggcctggcc
gggatccgcgacgcctacgagaccgggcgcgggtcgttcaagatgcgcgcgaccgcccgc
gtggagccggtcgggcggcgcaagggcatcgtggtgaccgagctgccgtacggcgtgggc
accgagaaggtcgtcgagcggatcaagaccctggtgcagggcaagaagctgcagggcatc
gccgacatcaaggacctcaccgaccgcgagcacggcctgcggctggtgatcgaggtcaag
aacggcttcgtgcccgaggccgtgctcgagcagctctacaagtcgacgccgctggaggac
tccttcggcatcaacgccgtggcgctggtcgacggccagccgcgcacgctgggcctcaag
cagatgctcgaggtgttcctggcccaccggttcgaggtcgtccgccgtcgctcgcagttc
cgccgcgaccgcaaggccgaccggctgcacctcgtcgacggcctcctcgtggcgctgctg
gacatcgacgaggtgatcgcggtgatccgctccagcgacgacgccggcgcggcccgcgag
cggctgagcacggtcttcgacctgtcgcgggcccaggccgactacatcctggagatgcag
ctgcgccggctgacccgcttcagccggatcgagctggagaaggagcaggagcagctgcgc
cgcgagatcgaggagctcgacgcgatcctggccgacgacgccctgctgcgcggggtggtg
tcggccgagctcgccgacgtggcggccacctacggcaccccgcgtcgtaccgtgctgctc
gagtcggccggggcgccggccgccgcggccgccgccggcgcgctcgaggtcgccgacgag
ccgtgcctggccctgctgtcctcggccggcctgctggcccgcacggccccgctggacccg
gacgccgcgggcggcggggtctccggggccgccgacggcagcgacgcccgccgggcccac
gacgtcgtggtctcctcggtccgcgccaccacgcgcggcgaggtcggggtgctcacctcc
gccggccgcctccaccggctcggggtgctggacctcccggcactgcccccgtcgaactcc
caccccgacctccagggcggggtgccgctgaccgagctgctcgtcctcgagcccggcgag
cgggccctggccctgtgctccctggccgaggacggccccggcctggctctcggcacccgc
accggcaccgtcaagcgggtcaaccccgaggtgctgaaccgcgacgcctgggaggtggtc
cgcctcgccgacggcgacgaggtcgtcggcgcggtcgagctgaccacgggcgccgagcag
ctgtgcttcgtctccagcggcgcccagctgctgcacttcggcgccgacgcggtgcgcccc
cagggccgtacgggcggcggcgtcgccgggatcaagctcggcgccggggagcgggtgctg
ttcttcggtgtcaccgaccccgccgcaccgcacggccacgaggtgctgaccgtctcgggc
gcctccacggcgctgccgggcacggaggtcggggcagccaagctgaccccgttcagcgag
taccccgccaagggccgcgccaccggcggggtgcgctgccaccgcttcctgcgcggcgag
gacaccctgctgctggcctgggtcggcccggccccggcgcgcgccgcggccgcgagcggc
gcacccatcgagctgcccgccccgaccggtcgtcgcgacgggtccggggtgccgctggcc
cagcccgtggcggcctgcgccggggccctgggcgcctcccccgcggccctcggggccggg
acgggcccgctgcccgacgcgggctccgaggacggtccggcgaccgacggtgtgggaggc
tga
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