Nocardioides aquaticus: ENKNEFLB_03213
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Entry
ENKNEFLB_03213 CDS
T07580
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
naqu
Nocardioides aquaticus
Pathway
naqu00470
D-Amino acid metabolism
naqu00550
Peptidoglycan biosynthesis
naqu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ENKNEFLB_03213 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ENKNEFLB_03213 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
naqu01011
]
ENKNEFLB_03213 (murD)
Enzymes [BR:
naqu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ENKNEFLB_03213 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
naqu01011
]
Precursor biosynthesis
Amino acid ligase
ENKNEFLB_03213 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
AlaDh_PNT_C
TrkA_N
ELFV_dehydrog
gpD
Motif
Other DBs
NCBI-ProteinID:
QVT80812
UniProt:
A0ABX8EL52
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All DBs
Position
complement(3305182..3306672)
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AA seq
496 aa
AA seq
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MSAAPRDPTDLGRLDSWEGVRTVVAGFGVSGFAAADNLTHLGSSVLAVDESEGDQERAEK
AELLEILGAEVRLGSGSTAELPPDVDLVVTSPGWRPSAPLLAQARARGIPVWGEVELAWR
LRHPEHDTPWLCVTGTNGKTTTTQMLDTILRAAGLRSLAVGNVGLPVVEAVMDPEPYDVL
AVELSSFQLHYTRSMSPQAAVVLNIAEDHLDWYSSMADYAADKGRVYEHVRDACVYNTAE
PLTEQLVRDADVVEGARAVGFGLEMPAVGMLGLVEDILVDRAFIPERATSAAELCTVGDL
ASAAPHYVSNALAAAALARAHGVSQAAVRDGLRAFRPDGHRITEVARHRDVVWVDDSKAT
NPHAAASSLMAYEPVVWVAGGLAKGAQFDELVRTVRDRLRGVVLIGRDRAVIAEALSRHA
PDVPVRQVEAREDGATRDDGGADLMGRVVAAAADLVVAGDTVLLAPGCASMDQFTSYAAR
GDAFAAAVRALAAEDR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcgccccgtgaccccaccgacctcggccgcctggactcctgggagggcgtg
cggacggtcgtggccgggttcggcgtctccggcttcgccgccgccgacaacctgacccac
ctcggctcctcggtcctggccgtcgacgagtccgagggcgaccaggagcgcgccgagaag
gccgagctgctggagatcctcggcgccgaggtccgcctcggcagcggctccaccgcggag
ctgccgcccgacgtcgacctcgtcgtcacctcgccggggtggcggccgagcgcgccgctg
ctggcgcaggcccgggcccgtggcatcccggtctggggcgaggtcgagctggcctggcgg
ctgcgccaccccgagcacgacaccccgtggctgtgcgtcacgggcaccaacggcaagacc
accaccacccagatgctcgataccatcctgcgcgccgccggcctgcgcagcctggcggtc
ggcaacgtcgggctcccggtggtcgaggccgtgatggaccccgagccgtacgacgtcctc
gccgtggagctctccagcttccagctgcactacacgcgctcgatgagcccgcaggccgcg
gtggtcctgaacatcgccgaggaccacctggactggtactcctcgatggccgactacgcc
gccgacaagggtcgggtctacgagcacgtgcgggacgcctgcgtctacaacaccgccgag
ccgctcaccgagcagctggtccgcgacgccgacgtcgtcgagggtgcccgcgcggtcggg
ttcggcctcgagatgccggccgtgggcatgctcggcctggtcgaggacatcctggtcgac
cgggccttcatccccgagcgcgccaccagcgccgccgagctgtgcaccgtcggcgacctc
gcctccgccgcgccccactacgtctcgaacgcgttggccgcggccgcgctcgcccgggcc
cacggcgtcagccaggcggcggtgcgcgacgggctgcgcgccttccggcccgacgggcac
cggatcaccgaggtcgcccggcaccgcgacgtcgtgtgggtcgacgactcgaaggccacc
aacccgcacgccgccgcgtcctcgctgatggcctacgagcccgtggtctgggtggccggg
gggctcgcgaagggcgcccagttcgacgagctggtgcgcaccgtgcgcgaccggctgcgc
ggggtggtgctgatcggccgcgaccgcgccgtcatcgccgaggccctttcgcgacacgct
ccggatgtgccggtccgacaggtggaggcccgcgaggatggggccacgcgagacgacggt
ggagcggacctgatgggacgggtcgtcgccgcggcggccgacctggtcgtcgccggggac
acggtgctgctggcaccgggatgcgcctcgatggaccagttcacctcctacgccgcgcgg
ggcgacgcgttcgccgccgcggtacgggccctcgccgccgaggaccgctga
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