Nocardioides aquaticus: ENKNEFLB_03823
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Entry
ENKNEFLB_03823 CDS
T07580
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naqu03016
]
ENKNEFLB_03823 (rnd)
Enzymes [BR:
naqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ENKNEFLB_03823 (rnd)
Transfer RNA biogenesis [BR:
naqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ENKNEFLB_03823 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QVT81413
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All DBs
Position
3895191..3896537
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AA seq
448 aa
AA seq
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MPADAPETPDQAATDEQDGTVEPDEHVEPAELLTLRDGLPEITDTEAGLAEVCARVAAGT
GPVALDAERASGYRYSNRAYLVQLRREGSGSALVDPIAFTSMAPLAEAIGDAEWILHAAS
QDLPCLADIGLRPASLFDTELAGRLLGYPRVGLATLVETLLGYRLKKEHSAVDWSTRPLP
RPWLEYAALDVEVLLELREVLLAELVEQGKDGWARQEFDHLLGFEPTVRQEAWRRTGGLH
RVRGRRNLAAVRELWETRDELAERRDVTPGRIVPDAAIIAAATAQPTDRDSLMRTPGFHG
RGADRYAARWVEALQRAAAMSEDELPARTQRTDGPPTARAWAERDPVAAARLRLAREELA
TLSTEQRVPAENLLTPDFLRRTLWTPPETREPGELLDEVVARLTEYGARSWQSALVAPVL
VRAILQADVEAAADPAGEDEPAPPVQDS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgcccccgagaccccggaccaggctgccaccgacgagcaggacggcacg
gtcgagccggacgagcacgtcgagccggccgagctcctgacgttgcgcgacgggctgccc
gagatcaccgacaccgaggccggcctggccgaggtctgcgcccgggtggccgccggcacc
ggcccggtcgcgctcgacgccgagcgcgcctccgggtaccgctactccaaccgcgcctac
ctggtccagctgcgtcgtgagggctcgggctcggccctggtcgacccgatcgcgttcacc
tcgatggcacccctcgccgaggcgatcggcgacgccgagtggatcctccacgccgccagc
caggacctcccctgcttggccgacatcgggctgcgaccggcctcgctgttcgacaccgag
ctcgccgggcggctcctgggatacccccgcgtcggactcgcgaccctggtggagacgctg
ctgggctaccggctcaagaaggagcactcggccgtcgactggtccacccgtcccctgccg
cggccctggctggagtacgccgcgctcgacgtggaggtcctgctcgagctgcgcgaggtg
ctgctcgccgagctggtcgagcagggcaaggacggctgggcgcgccaggagttcgaccac
ctcctgggtttcgagcccaccgtgcgccaggaggcctggcgtcgcaccgggggcctgcac
cgggttcgtggccgacgcaacctcgcggccgtgcgcgagttgtgggagacccgcgacgag
ctcgccgagcgccgtgacgtgacgccgggccggatcgtcccggacgccgcgatcatcgcg
gccgccaccgcccagcccaccgaccgcgactccctgatgcgcaccccgggcttccacggc
cgcggcgccgaccgctacgccgcccggtgggtggaggccctccagcgtgccgccgcgatg
tccgaggacgagctgccggcccgcacccagcgcaccgacggcccgccgaccgcccgcgcc
tgggccgagcgcgacccggtggcggccgcccggctgcgcctggcccgcgaggagctggcg
acgctgtcgaccgagcagcgcgtaccggccgagaacctgctcacccccgacttcctgcgc
cgcacgctgtggaccccaccggagacccgcgagcccggtgagctgctggacgaggtcgtc
gcccggctgacggagtacggcgcccgcagctggcagtccgcgctggtcgccccggtcctg
gtacgcgccatcctgcaggccgacgtcgaggccgctgcggaccccgccggcgaggacgag
ccggccccgccggtccaggacagctga
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