Novosphingobium aromaticivorans: Saro_0120
Help
Entry
Saro_0120 CDS
T00322
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Saro_0120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nar03021
]
Saro_0120
03019 Messenger RNA biogenesis [BR:
nar03019
]
Saro_0120
Transcription machinery [BR:
nar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Saro_0120
Messenger RNA biogenesis [BR:
nar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Saro_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
ATPase_2
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
Fungal_virus_P2_C
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABD24569
UniProt:
Q2GC54
LinkDB
All DBs
Position
121800..123056
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKDLKKKTPAELVQMAEELEVEGASTMRRQDLMFAILKEMAEDGEEILGIGTIEVLPD
GFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEVRAPKDGERYFAITRLIKVN
FDDPEAVRHRVNFDNLTPLYPNERLKLDTLDPTVKDKSARVIDLVSPQGKGQRALIVAPP
RTGKTVLLQNMAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVKGEVISSTFDEPASRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVPKDQLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaagacctcaagaagaagacccccgccgagctggtccagatggccgaagag
ctcgaggtcgaaggcgccagcaccatgcgtcgccaggacctgatgttcgctatcctcaag
gaaatggccgaagacggcgaggaaatcctcggcatcggcacgatcgaggttcttcccgac
ggtttcggcttcctgcggagccccgaagcgaactatctcgccggacccgacgatatctac
gtctcgccgaaccaggtccgcaaatggggcctgcgcaccggcgacacggtggaaggcgaa
gtccgcgcgcccaaggacggggagcgctatttcgcgatcacccgtctgatcaaggtgaac
ttcgacgatcccgaggccgtgcgccaccgtgtcaacttcgacaacctgaccccgctctat
ccgaacgagcgactgaagctcgacacgctcgacccgacggtcaaggacaagtcggctcgt
gtgatcgatctcgtttcgccacagggcaagggccagcgcgcgctgatcgtcgcccctccg
cgcaccggcaagaccgtgttgctgcagaacatggccaaggcgatcacagacaaccatccg
gaagtcttcctgatcgtgcttctggttgacgaacgtcccgaagaagtcaccgacatgcag
cgttcggtgaagggcgaggtcatttcctcgacctttgacgaaccagcctcgcgccacgtc
caggtcgctgaaatggtcatcgagaaggccaagcgtcttgtcgagcacaagcgcgacgtg
gtgatcctgctcgactcgatcacacgtctcggccgtgcgtacaacaccgtcgtgccctcg
tcgggcaaggtgctgaccggcggtgtcgatgccaacgccctgcagcgtcccaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctttcgatcattgccacggcgctg
atcgataccggcagccgcatggacgaagtgatcttcgaagagttcaagggcaccggcaac
tcggaaatcgtgctggaccgcaaggttgcggacaagcgcatcttcccggcgctggacgtg
ggcaagagcggtacccgcaaggaagaactgctcgtaccgaaggatcagctctcgaagatg
tgggtcctgcgccgcatcttgatgcagatgggcactgtcgatgcgatggagttcctgctc
gacaagatgaaggattcgaaaaccaacgaagacttcttcgcgacgatgaaccagtaa
DBGET
integrated database retrieval system
