Novosphingobium aromaticivorans: Saro_0171
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Entry
Saro_0171 CDS
T00322
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Saro_0171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_0171
Enzymes [BR:
nar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Saro_0171
DNA repair and recombination proteins [BR:
nar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Saro_0171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ABD24620
UniProt:
Q2GC03
LinkDB
All DBs
Position
complement(171381..172742)
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AA seq
453 aa
AA seq
DB search
MKRTVEDRFGFVRVRGELSGVKRAASGHLYLCLKDENARLDGVMWRGNAQRLNFRPEDGV
EVIATGKLTTYPGRSNYQIVIDRMEIAGEGALLALLAKLKARLEGEGLFDPARKKALPFL
PRTIGVVTSPTGAVIRDILHRLSDRFPCRVIVWPVLVQGQGAAAQVANAVRGFSAMEPGG
PIPRPDLVIVARGGGSIEDLWSFNEEEVVRAVADCTIPIISAVGHETDTTLCDFAADLRA
PTPTAAAELAVPVQAELAAFVADLNARQRRALGRQLGQARERLEARSQRLPQPHALLQGQ
AQRVDDLGDRLRLALLHRTEIAASQLARHAGALRPALLSARVDRERERLAARRLRPEALL
QRIDHARGKVDALDRLRRSLNPEAPLERGYVLVTDSDGHLVKDRATAATRAALTLKFADG
TLDVSTGAPPPAGSRSASKPRQAARPEGQQELF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgcacggtggaggatcgcttcggctttgtgcgcgtgcgcggcgagctgtccggc
gtgaagcgcgccgcctcgggccacctctacctctgtctcaaggacgagaacgcgcggctc
gatggcgtgatgtggcgcggcaatgcccagcgcctcaacttccggcccgaggacggcgtg
gaagtgatcgcgaccggaaagctcaccacatatccgggacggtccaactaccagatcgtg
atcgaccggatggagattgcgggcgaaggcgcgctgcttgcactgctcgccaagctcaag
gcacggcttgagggcgagggactgttcgatccggcgcgcaagaaggccctgcccttcctg
ccgcgcaccatcggggtggtcacatctccgaccggcgccgtgatccgggacattctccac
cgcctgtcggaccgttttccctgccgcgtgatcgtctggccggtgctggtccagggtcag
ggcgcggcggcgcaggtggcaaacgcggtgcgcgggttctccgccatggagcccggcggc
ccgatcccgaggcccgatctcgtcatcgtcgcgcgcggcggtggctccatcgaggacctg
tggtcgttcaacgaggaagaggtcgtccgcgccgtggcggattgcacgattccgatcatc
agcgccgtcggccacgagaccgacaccacgttgtgcgatttcgccgccgaccttcgcgcc
cccacccccaccgccgccgcggagctggcggtgcccgtgcaggccgaacttgccgccttc
gtcgccgatctcaatgctcgccagcgccgcgctctcggccgtcaactcggccaggcaagg
gagcgcctcgaagcgcgcagccagcgcctgccccagccccacgcgctcctgcaaggccag
gcccagcgcgtcgatgatctcggcgaccgccttcgcctcgcgcttctccaccgcaccgaa
atcgccgcctcgcaactcgcgcgccacgccggcgccctgcgccctgccctgctttccgcg
cgggtcgatcgcgagcgcgaacgccttgccgcgcgccgactgagaccggaagccctgctt
cagcgcatcgaccatgcgcgaggcaaggtcgatgcgctggaccgcctgcgccgctcgctc
aacccggaggcgcctctcgaacgcggctacgtgctggtcaccgacagtgatggacacctg
gtcaaggatcgcgcgaccgccgcgacccgcgccgcgctcacgctcaagttcgccgacggc
acgctcgacgtcagcaccggtgcgccgccccccgcaggctcccgctccgccagcaagccg
cgccaggccgcacggcccgaaggacagcaggaattgttctga
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