KEGG   Novosphingobium aromaticivorans: Saro_0318
Entry
Saro_0318         CDS       T00322                                 
Name
(GenBank) type II secretion system protein E
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nar00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Saro_0318
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_0318
Enzymes [BR:nar01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Saro_0318
Secretion system [BR:nar02044]
 Type IV secretion system
  Trb secretion system protein
   Saro_0318
SSDB
Motif
Pfam: T2SSE Zeta_toxin AAA_16 CbiA TrwB_AAD_bind FtsK_SpoIIIE AAA_28 nSTAND3 AAA_19 AAA_25 MMR_HSR1 IstB_IS21 DEAD CLP1_P MobB MoCF_biosynth ATPase GTP_EFTU TsaE ABC_ATPase DUF815 Sigma54_activat AAA_22 Ribosomal_L18 AAA_7 Septin P-loop_TraG
Other DBs
NCBI-ProteinID: ABD24766
UniProt: Q2GBK7
LinkDB
Position
complement(342540..343523)
AA seq 327 aa
MSVIPIRSEAATRGARMLRTALGPEIGAWLEDQAVIEVMLNPDGRLWVDRLGLGIADTGA
VLSAADGERIIRLVAHHVGAEVHSGAPRVSAELPGTGERFEGLLPPVVAAPSFAIRKPAG
AVFTLADYVAAGIMPAASADALAAAVAARANILVAGGTSTGKTTLTNALLAEVARTGDRV
VLIEDTRELQCAAPNLVALRTKDGVASLADLVRSALRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGVGTIHAGSALGTLRRLEQLIQESVVTVPRALIAETIDVIAVLVRDGTGRRLSE
LVRIEGLDAAGDYRLVPLVPATEGECP
NT seq 984 nt   +upstreamnt  +downstreamnt
atgagcgtcattccgatccggtccgaggcagcaacgcgcggtgcgcgcatgctccgcacg
gcgctcgggcccgagatcggggcctggctggaagatcaggcggtcatcgaagtcatgctc
aatcctgacggacggctctgggtcgaccggctcgggcttgggattgccgatacgggcgcg
gtgctgtccgccgccgatggcgagcggatcatccgccttgtcgcgcatcatgtgggcgcc
gaggtgcactcaggcgcgccgcgggtctcggcggaattgcccgggacgggggagcgattc
gaggggctgttgccgccggtggtggcagcgcccagcttcgcgatccgcaagccggccggc
gcggtgttcacactggcagactatgtcgcggccgggatcatgccggcggcatccgccgat
gctcttgctgccgcggtcgcggcgcgggccaatatcctcgtcgcgggcgggacgtcgacc
ggcaagacgacgctgaccaatgctctcctcgccgaggtcgcccggaccggcgaccgggtg
gtgctgatcgaggatacgcgcgagctgcaatgtgccgcgcccaatctggtggcgctgcgc
accaaggatggcgtggcctcgcttgccgatctggtgcgttcggccctgcgcctgcgccct
gaccggatccccatcggcgaggtacgcggcgccgaggcgctcgatctcctcaaggcctgg
ggcaccgggcatcccggcggggtcggaacgatccatgcaggctctgcgctcggcacgctg
cggcggctcgagcagctgatccaggaaagcgtggtcacggtgccgcgcgccctcattgcc
gagacgattgatgtcatcgccgtgctcgtccgcgacggcaccggtcggcgcctgtccgag
ctggtccgcatcgaaggcctcgatgccgccggtgactaccgcctcgtcccccttgtccct
gcaaccgaaggagaatgcccgtga

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