Novosphingobium aromaticivorans: Saro_0573
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Entry
Saro_0573 CDS
T00322
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nar
Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Saro_0573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nar03019
]
Saro_0573
03009 Ribosome biogenesis [BR:
nar03009
]
Saro_0573
04131 Membrane trafficking [BR:
nar04131
]
Saro_0573
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nar04147
]
Saro_0573
Messenger RNA biogenesis [BR:
nar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Saro_0573
Ribosome biogenesis [BR:
nar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Saro_0573
Membrane trafficking [BR:
nar04131
]
SNARE
SNARE associated proteins
Others
Saro_0573
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Saro_0573
Exosome [BR:
nar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Saro_0573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
nSTAND3
AAA_28
AAA_7
NPHP3_N
AAA_18
RNA_helicase
Zeta_toxin
AAA_3
Mg_chelatase
ABC_tran
DUF815
AAA_17
AAA_24
Sigma54_activat
TsaE
AAA_19
AAA_30
AAA_11
Parvo_NS1
NB-ARC
bpMoxR
PhoH
ATPase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABD25020
UniProt:
Q2GAV3
LinkDB
All DBs
Position
619329..621647
Genome browser
AA seq
772 aa
AA seq
DB search
MADAATEARTEGRTVRLQVAGARQEESGHGIARISRHVMSQLGVTEGDVIEIVGKRATAA
RVIQPYPEDEGLELIRLDGLQRANADVGSGEHVEVRKIDSRPAQRVVFAPAQKDLRLQGP
AVALKRNFAGRPLVTGDLVATAGQQQVNRTDMPPQLRQMLNAPAFALTQIRLTVVSTSPK
GVVHIDENTEVELRPEYEEPRSSRADVNYDDVGGMGDTIRQLREMVELPLRYPELFTRLG
VDPPKGVLLHGPPGTGKTRLARAVANESDASFFTINGPEIMGSAYGESEKRLREVFEEAT
ANSPSIIFIDEIDSIAPKRSEVHGEAEKRLVAQLLTLMDGLHSRSNLVVIAATNRPDAID
EALRRPGRFDREIVVGVPDESGRREILGIHTRGMPLAEDVDLQELARTTHGFVGADLAAL
AREAAIEAVRRIMPRLDFEQQTIPQDVLDSLRVERDDFLEALKRVQPSAMREVMVQAPTI
GWADIGGLDEAQEKLREGVELPLKNPEAFHRLGIRPAKGFLLYGPPGTGKTLLAKAVAKE
AEANFIAIKSSDLLSKWYGESEQQIARLFARARQVAPCVVFIDEIDSLVPARGSGQGEPN
VTARVVNTILAEMDGLEELQSVVLIGATNRPNLVDPALLRPGRFDELVYVGTPSMSGREH
ILGIHTRNMPLAPDVDLALVARATDRFTGADLEDVVRRAGLNAIRRGGGNVDQVKASDFD
EALEDSRATVTEQMEEEYGRMKGELKKRAMNPGPLGFIVPGMVQPTRESKHG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcggcaaccgaagcccggaccgaggggcgcaccgtgcgcctgcaggtggcg
ggcgcccgccaggaagaaagcggccacggcatcgctcgcatcagccggcatgtcatgtcg
cagctcggcgtgaccgaaggcgacgtgatcgagatcgtcggcaagcgcgccaccgccgcg
cgggtcatccagccctatcccgaggacgagggcctcgaactcattcgcctcgacgggctc
cagcgcgccaacgccgatgtcggctcgggcgagcatgtcgaagtgcgcaagatcgattcg
cgccccgcccagcgcgtcgtcttcgcgccggcgcagaaggacctgcgcctccagggcccg
gcggttgcgctcaagcgcaatttcgcggggcgcccgctggtcaccggcgacctcgtcgcg
acggcggggcagcagcaggtcaaccgcaccgacatgccgccgcaactgcgccagatgctc
aatgcgccggcgtttgcgctcacccagatccgcctcaccgtcgtctcgaccagccccaag
ggcgtggtccacatcgacgagaacaccgaggtcgagttgcgccccgaatacgaggagccg
cgcagctcgcgcgccgacgtcaactacgacgacgttggcggcatgggcgataccatccgc
cagctccgcgagatggtcgagctgccgctgcgctatcccgaactcttcacccgcctcggc
gtcgatccgcccaagggggtgcttctccatggcccgccgggcaccggcaagacccgcctc
gcccgcgccgtcgcgaacgagagcgacgcctcgttcttcaccatcaacgggcccgagatc
atgggctcggcctatggcgagagcgagaagcgcctgcgcgaggtgttcgaggaggcaacc
gccaactcgccgtcgatcatcttcatcgacgagatcgattcgatcgcgcccaagcgcagc
gaagttcacggcgaggccgagaagcgcctcgtcgcgcagctcctcacgctgatggacggc
ctgcacagccgctcgaacctggtcgtcatcgccgccaccaaccggcccgacgcgatcgac
gaggccttgcgccgtcccggtcgcttcgaccgcgagatcgtcgtcggcgttccggacgaa
agcggccggcgcgagatcctcggcatccacacccgcgggatgccgctggccgaggatgtc
gacctccaggagcttgcccgcaccacgcacggcttcgtcggcgcggatcttgcggctctt
gcccgcgaagccgcgatcgaggctgtccgccgcatcatgccgcggctcgatttcgaacag
cagaccattcctcaggacgtcctcgacagcctgcgggtggaacgcgacgatttcctcgag
gcactgaagcgcgttcagccctcggccatgcgcgaagtcatggtccaggctccgaccatc
ggctgggccgacatcggcggtctggacgaagcgcaggaaaagctgcgcgaaggcgtcgag
ctgccgctgaagaaccccgaggccttccaccgcctcggcatccggccggccaagggcttc
ctgctctatggtccgcccggcaccggcaagaccctgctggccaaggccgtggcgaaggag
gcggaagccaacttcatcgcgatcaagtcgtccgacctcctgtccaagtggtacggggag
agcgaacagcagatcgcgcgcctcttcgcccgcgcccgccaggtcgcgccttgcgtggta
ttcatcgacgagatcgacagcctcgtccccgcgcgcggcagcgggcagggcgaacccaac
gtcacagcgcgggtggtcaacaccatccttgccgagatggacgggctggaggaactgcaa
tccgtcgtcctgatcggcgcgaccaaccgacccaacctcgtcgatcctgcgctgctccgt
ccgggtcgtttcgacgaactggtctatgtcggcacgccgagcatgtccgggcgcgagcac
atcctgggcatccacacccgcaacatgccgctcgcccccgacgtggacctcgccctggtc
gcccgcgcgaccgaccgcttcaccggcgccgatctcgaggacgtggtgcgccgggcgggc
ctgaacgccatccgtcgcggcggcggcaacgtcgatcaggtcaaagcttccgacttcgac
gaagccctcgaagactcgcgcgccacggtgaccgagcagatggaggaagagtacggccgg
atgaagggcgaactgaagaagcgcgcgatgaaccccggtccgctcggcttcatcgttccc
ggcatggtccagccgacgcgcgaatcgaagcacggctga
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