KEGG   Novosphingobium aromaticivorans: Saro_1192
Entry
Saro_1192         CDS       T00322                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Saro_1192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nar03400]
    Saro_1192
DNA repair and recombination proteins [BR:nar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Saro_1192
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Saro_1192
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 DnaJ_CXXCXGXG AAA_29 AAA_25 AAA_21 BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: ABD25637
UniProt: Q2G936
LinkDB
Position
1235856..1238768
AA seq 970 aa
MSLTTISVRGAREHNLKGIDVDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEVYDYMRLLWARVGIP
YSPATGEPISAQTVSQMVDRVMALPEGTRAYLLAPVVRGRKGEYRRELAEWQKAGYTRVR
INGEMMPIEDAPALDKKLKHDIEVVVDRIAVRDGIQTRLADSFEQALKLADGLAYIDLAD
GVVPGREDEAEADAKGKKGSMKKTGLPANRIVFSEKFACPVSGFTIESIEPRLFSFNAPQ
GACPACDGLGEKLLFDPQLVVPNENLSLKQGAVVPWAKSNPPSPYYMQVLASLAGHFGFS
LDTPWDALPAEVKIVILYGTAGKAVPLTFIDGKKSYTVQKAFEGVIGNLNRRMLQTESAW
MREELGKFQTAQPCETCEGKRLKPEALSVKVAGADISSITRLSVAAAVEWYGALDSKLTP
QQSQIARAILKEINERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLY
VLDEPSIGLHQRDNDRLLETLKRLRDLGNTVIVVEHDEDAIRTADHVVDLGPGAGVHGGE
IVAQGTLDDILSNPNSLTGQYLTGARRIEVPAHRRPGNGLYIGVEGARANNLQNVSAKIP
LGTFTCVTGVSGSGKSSFTIDTLHAVAARTLNGARVIAGAHDRVTGLEHCDKVIEIDQSP
IGRTPRSNPATYTGAFTLIRDWFAGLPESAARGYKAGRFSFNVKGGRCEKCQGDGLIKIE
MHFLPDVYVTCEECDGKRYNRETLEVKFKGHSIADVLDMTIEDAEEFFKAVPPIRDRMHM
LNEVGLGYVKVGQQATTLSGGEAQRVKLAKELARRSTGQTLYILDEPTTGLHFEDVRKLL
EVLHRLVEQGNSVVVIEHNLDVIKTADWIIDLGPEGGVRGGEIVAEGTPEQVAKNPRSFT
GQYMAPLLKR
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgtctctcactaccatttccgtccgcggcgctcgtgaacacaatctcaaggggatcgac
gtcgatctcccgcgcgacagcctgatcgtcatcaccggcctttccggctccggcaagtcg
agcctggcgttcgacacgatctacgccgaagggcagcgccgctacgtggaatcgctctcg
gcctacgcgcgccagttcctcgagatgatgcagaagccggatgtcgagcatatcgacggc
ctctcgcccgccatctcgatcgagcagaagaccaccagccgcaacccgcgctccaccgtc
gccacggtgaccgaggtctacgactacatgcgcctgctctgggcgcgcgtcggcattccc
tattcccccgccaccggcgaaccgatcagcgcgcagaccgtcagccagatggtcgaccgc
gtcatggccctgcccgaaggcacccgcgcctacctgctcgctcccgtcgtgcgcggccgc
aagggcgaataccgccgcgaactcgccgaatggcagaaggccggctacacccgcgtccgc
atcaacggcgaaatgatgcccatcgaggacgcccccgcgctcgacaagaagctcaagcac
gacatcgaggttgtggtcgatcgcatcgccgtccgcgacggcatccagacgcgcctcgcc
gacagcttcgaacaggccctcaagctcgccgacggccttgcctacatcgatctggcggat
ggcgtcgtgcctggccgtgaggacgaggcggaggccgatgccaagggcaagaagggctcg
atgaagaagaccggcctcccggccaaccgcatcgtcttctccgaaaagttcgcctgcccc
gtcagcggcttcaccatcgagagcatcgagccgcgcctgttctcgttcaacgccccccag
ggcgcctgccccgcgtgcgacggtctgggcgaaaagctgctgttcgatccccagctcgtc
gtccccaacgagaacctcagcctcaagcagggcgccgtcgtcccctgggcgaaaagcaac
ccgccgtcgccctactacatgcaggtcctcgccagcctcgccggccacttcggcttcagc
ctcgacaccccgtgggacgcgctcccggcggaagtgaagatcgtcatcctctatggcacc
gccggcaaggccgtcccgctcaccttcatcgacggcaagaagtcctacaccgtccagaag
gccttcgaaggcgtgatcggcaacctcaaccgccgcatgctgcaaaccgaatccgcctgg
atgcgcgaggaactcggcaagttccagaccgcccagccgtgcgagacctgcgaaggcaag
cgcctcaagcccgaggccctgtcggtcaaggtcgccggggcagacatctcctcgatcacc
cgcctctccgtcgccgccgcggtcgaatggtacggcgcgctcgacagcaagctcaccccg
cagcaaagccagatcgcccgcgccatcctcaaggaaatcaacgagcgtctcggcttcctc
aacaacgtcggcctcgattacctcaacctcgatcgcacctcgggcacgctctcgggcggc
gagagccagcgcatccgcctcgccagccagatcggctccggcctctcgggcgtgctctac
gtgctcgacgaaccgtccatcggcctccaccagcgcgacaacgaccgcctcctcgaaacc
ctcaagcggctgcgcgatctcggcaacaccgtgatcgtcgtcgaacacgacgaggacgca
atccgcaccgccgaccacgtggtcgatcttggccccggcgcgggcgtccacggcggcgag
atcgtcgcgcagggtacgctcgacgatatcctgtccaacccgaacagcctcaccggccag
tacctcaccggcgcgcgccgcatcgaggtcccggcgcaccgccgccctggcaacggcctg
tacatcggcgtcgaaggggcgcgcgccaacaacctccagaacgtcagcgcgaagatccct
ctcggcaccttcacctgcgtcaccggcgtctccggctcgggcaagtcgagcttcacgatc
gacaccctccacgccgttgccgcccgcacgctcaatggcgcgcgcgtgatcgccggcgcg
cacgaccgcgtcaccggcctcgaacattgcgacaaggtgatcgagatcgaccagtcgccc
atcggccgcaccccccggtcaaaccccgccacctacaccggcgccttcaccctgatccgc
gactggttcgccggactgcccgaatccgccgcgcgcggctacaaggccggtcggttcagc
ttcaacgtcaagggcggccgttgcgagaagtgccagggcgatggcctgatcaagatcgag
atgcacttcctgcccgacgtctacgtcacctgcgaggagtgcgacggcaagcgctacaac
cgcgaaacgctcgaggtgaagttcaagggccactccatcgccgacgtgctcgacatgacg
atcgaggacgccgaggagttcttcaaggccgtccccccgatccgcgaccggatgcacatg
ctcaacgaagtgggcctgggctacgtcaaggtcggccagcaggcgacgacgctaagcggc
ggcgaggcccaacgcgtgaaactcgccaaggaactcgcccgccgctccaccgggcagacg
ctctacatcctcgacgaacccaccaccggcctccacttcgaagacgtgcgcaaactgctc
gaagtcctccaccgcctcgtcgaacagggcaacagcgtggtcgtgatcgaacacaacctc
gacgtgatcaagaccgccgactggatcatcgacctcggccccgaaggcggcgtgcgcggc
ggcgaaatcgtcgccgaaggcactcccgaacaggtggccaagaacccgcgcagcttcacc
ggccaatacatggcccccctgctgaaacgctga

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