Novosphingobium aromaticivorans: Saro_1619
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Entry
Saro_1619 CDS
T00322
Name
(GenBank) Cadherin
Organism
nar
Novosphingobium aromaticivorans
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Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
Peptidase_M10_C
Polysacc_deac_1
CBM77
Motif
Other DBs
NCBI-ProteinID:
ABD26059
UniProt:
Q2G7W4
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Position
1688627..1692235
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AA seq
1202 aa
AA seq
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MTYIQIDGSLSDWSSNLRIDAGAVDGYQIYATTDATDYIFAFAAPTAVGANTTIWLNTDL
NQATGYQLWGTVGAEFNVNFKSDGSAALYSGAAGGTLVADNLVLAYNADKTMVELRVPKD
LLGNPGSIDTVYDINDTAIIPSFYQDNAIRVWDDSELASVIPATDTRIAIVYSATTAANY
FSQTAYSDLFMAAQSQAAQAGVPFDIITEADLTDINKLAQYKAIVFPSFRNVQASQADEI
AHTLQLASQEFHVGFIVSGEFMTNDENGNAMAGNSYSRMATLLDATRVTGGTATSLTVTA
TDPTGVVLDGYANGELVNQYANVGWNAFQSVSGTGQTIATETINGSSTYAAVLATQTGGR
NVLFSSDAVMADANMLQRAIDYAVSGETVTVSLNMTRDAGLVAARVDMDQSMYIEDVNGG
IYDQLVPLLQQWKAQYNFVGSFYVNIGDNTQQGIYTDWNKSLPYYTAMIGLGNEIGTHTY
THPEDTNLLSPSQLQFEFELSTQILEQKLSAALGYAYTIEGAAIPGAPETLTTSLAIEQY
VKTYLTGGYTGQGAGYPNAFGYLTPGSQDKVYIAPNTFFDFTLFDWLHLSAADASALWQS
QYEKIVSQADSPVVVWPWHDYGATAFNSPNYAPEIFNTFLAQAAADGMEFVTLADLANRI
NAFHGAKVTTSVSGNTITANVTASGNVGTFAFDLQGQGSQVISSVAGWYAYDSDSVFLPQ
NGGTFVITLGAAQTDVTHIIDLPMRATLMSVTGNGTNLSFQIQGEGTVVIDLSDPTNKSV
QVSGATIVSQVGDKLTIDIGPVGSHTVTVTQTSLNHAPVIESNGGGDTAAISLAENLLAV
TAVIATDADANALTYSITGGADASKFTINATTGALAFLAAPNFEVPTDVGGNNVYDVVVT
ASDGALTDSQALAVTVTNVNEAPVITSNGGGATASISLAENNAAVTVVTSTDPENTARTY
SLSGTDAARFTIDAATGALSFVNAPDFENPTDVGANNVYNVVVTASDGSLTDTQALAITV
TNKKGVTLNASSSTGSVLNGTGEEDQLNGWKGADTLYGLGGNDRLDGAGGNDRLYGGDGK
DVLIGGAGTDIMSGGAGADRFEFNALGNSVTGALHDVITDFEAGIDLIDVSSIDANSGKG
GNQTFVLLAEGAAFTGVGQLRYFYDSATDQTIVQGNVNNNLAADFEIALSGHQTLSASMF
IL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgacctacattcagatcgatggttcgctgtcggactggtcctcgaacctgaggatcgac
gcgggcgccgtggacggctaccagatctatgccacgaccgatgcgaccgactatatcttc
gctttcgcagcgcccacggcggttggtgcgaacacgacgatctggctcaacacggatctc
aaccaggcgaccggctaccagctctgggggactgttggcgccgagttcaacgtcaacttc
aagtccgacggctctgcagcactttattcgggggcagccggcggaacgcttgtcgcggac
aacctcgtccttgcctacaacgccgataaaacaatggtcgagctgcgcgttccgaaggat
ctgcttggcaaccccggttcgatcgacaccgtgtacgacataaacgacacggcgatcatt
cccagcttctaccaggacaacgccatccgggtctgggacgattccgagctggccagcgtc
atcccggcgacagatacccgtattgcgatcgtctattcagcgacgacggcggccaactac
ttcagccagactgcctattcggacctgttcatggccgcccagtcgcaggcggcgcaggct
ggcgtgcccttcgacatcatcaccgaggccgaccttaccgacatcaacaagctcgcccag
tacaaggcgatcgtcttcccctcgttccgcaacgtgcaggcaagccaggccgacgagatc
gcgcacacccttcagctcgcatcgcaggagttccacgtcggcttcatcgtgtccggcgag
ttcatgaccaatgacgagaacgggaatgccatggccggcaattcctattcccgcatggcg
acgctgcttgacgccacgcgcgttacgggtggcaccgctacgtcactgacggtcacggcc
accgacccgaccggcgtcgtccttgatggctatgccaacggggaactggtcaatcagtat
gccaacgtcggctggaacgctttccagagcgtgagcggcaccggccagaccatcgccacc
gaaaccataaatggttcgtcgacatacgctgcggttctcgccacccagactggtggtcgc
aacgtcctcttctcgagcgatgcggtgatggccgacgccaacatgctgcaacgcgccatc
gattatgccgtgagcggcgagacggtgaccgtttcgctgaacatgacccgcgacgccggc
cttgtcgccgcgcgcgtggacatggaccagagcatgtacatcgaggacgtcaacggcggc
atctatgaccagctcgttccgctgcttcagcaatggaaggcgcaatacaacttcgtcggc
tcgttctacgtcaacatcggcgacaacacccagcaggggatctataccgactggaacaag
tcgctgccgtactacacggcgatgatcggcctcggaaacgagatcggcacgcacacctat
acccaccccgaagacaccaacctgctgagcccgtctcagttgcagttcgaattcgagctg
agcacccagatcctcgagcagaagctcagcgcggcgctgggttatgcctataccatcgaa
ggtgccgcgatccccggcgcgccggaaacgctgacgacttcgctggccatcgaacaatac
gtcaagacctatctgactggcggctacactggtcaaggcgcgggctatcccaacgccttc
ggctatctgacgcccggtagccaggacaaggtctatatcgcgccgaacacctttttcgat
ttcaccctgttcgactggctgcacctttcggcggcggatgccagcgcgttgtggcagtct
cagtacgagaagatcgtcagccaggccgactctcccgtcgtcgtctggccatggcacgat
tacggtgcgacggcgttcaattcgcccaactacgcgcccgaaatcttcaacacgttcctt
gcccaggccgcagccgacggcatggaattcgtgaccctcgccgacctggccaatcgcatc
aacgccttccatggcgccaaggtgacgacttcggtctcaggcaacacgatcaccgccaat
gtcaccgcttccggcaacgtcggtacgtttgctttcgatctgcaggggcagggcagccag
gtcatttcgagcgtggccggttggtatgcatacgacagcgacagcgtgttcctgccccag
aatggcggcacgttcgtcatcaccctgggcgcggcgcagacggatgtgactcacatcatc
gatctgcccatgcgggcgacgctgatgtcggtgacggggaatggcacgaacctgtcgttt
cagatccagggcgaaggcacggttgtcatcgatctttccgatccgaccaacaagagcgtc
caggtgtctggcgccaccatcgtttcccaggtcggagacaagcttaccatcgatatcggg
ccggtcgggtcgcacaccgttaccgtcacccagacttcgctcaaccacgcgccggttatc
gagtccaatggcggtggagacaccgcggcgatttcgctggcggagaacctcctcgcagtg
actgcggtcatcgcgaccgacgctgatgccaatgccctgacctactcgatcacgggaggg
gcggacgcatcgaagttcacgatcaatgcgacgacgggtgcgcttgcgtttctggccgcg
ccgaacttcgaagtcccgaccgatgtcggcggcaacaacgtatacgatgtcgtggtgact
gcatccgacggagcgctcaccgatagccaggcgctggccgtgacggtcacaaacgtcaac
gaggcgccggtaatcacgtcgaatggcggcggtgcgaccgcctctatctcgcttgccgag
aacaacgcggcggtcaccgtggtgacctcgaccgatccggaaaacaccgcgcggacgtat
tcgctctcgggtacggacgctgctcgcttcacgatcgacgccgcgaccggcgcgctcagt
ttcgtcaacgcgccagatttcgaaaaccccacggatgtgggggccaacaacgtctacaac
gtggtcgtgaccgcttccgacggcagcctgacggatacccaggcactggcaatcaccgtc
acgaacaagaagggcgtaaccctcaatgcttcgtcgagcaccggcagcgttctgaacggg
acgggcgaggaagaccagctcaatggctggaagggtgccgataccctctacggtctcggc
ggtaacgaccgtctcgacggtgcgggcggaaacgaccgcctttatggcggtgatggcaag
gacgttctgatcggcggcgccggtacggatatcatgtctggcggggctggtgcggaccgc
ttcgagttcaacgcgctggggaacagcgtgacgggtgcattgcacgacgtcatcaccgac
ttcgaagcgggcatcgacttgatcgatgtgtcgagcatcgacgcgaattccggcaaaggc
gggaaccagacctttgtcctgctagcggaaggtgcggcgttcacgggggtcgggcaactt
cgttacttctacgacagtgcgaccgaccagacgattgtccaaggtaacgtgaacaacaat
ctggcagccgatttcgaaatcgcattgtccggacatcaaaccctgtccgcaagcatgttc
atcctctga
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