Novosphingobium aromaticivorans: Saro_1780
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Entry
Saro_1780 CDS
T00322
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Saro_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_1780
Enzymes [BR:
nar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Saro_1780
DNA repair and recombination proteins [BR:
nar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Saro_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD26220
UniProt:
Q2G7F3
LinkDB
All DBs
Position
complement(1877572..1878348)
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AA seq
258 aa
AA seq
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MPDTADKPAPSFGDALAAALDWWRDAGVDGTFVDEPQDWLAAARLAAAAQAPTPQKPLRE
LIAERDDSPPPPTVSDRSGWPTELAAFADWWLAEPVLAPAGLRRLVPAGPAGAKLMIVVP
MPSADDGDTLLSGRAGRLLDAMLAAMGLERGETYIASAIPAHVPMPDWAALRQAGIGDVL
LHHIALVAPDRLLILGATSISTLLGNDPPNLAHSLQAINQNPSVIAALPAWDLEAMLARP
ALKAGFWSRWLDWTGTGT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgacaccgctgacaaaccagccccctctttcggcgatgcccttgcggcagcgctg
gattggtggcgcgacgccggggtggacgggaccttcgtcgacgagccgcaggattggctg
gccgccgcgcgccttgccgccgcggcccaggcccctactccgcagaagccgcttcgcgaa
ctcatcgccgaacgcgacgattcgccgccacccccgacggtaagcgaccggtccggctgg
ccgacggaactggccgccttcgcggactggtggctggcagagcccgtcctcgcgccggca
gggctgcgccgactggtgcctgccggtccggcgggggcaaagttgatgatcgtcgtgccg
atgccctcggcggacgatggcgacacgctcctctcgggccgagccggccggctgctcgac
gcgatgctggcggctatgggcctcgagaggggcgagacctacatcgcctctgccatacct
gcgcacgtgcccatgccggactgggcggccctgcgccaagccgggatcggcgacgttctg
ttgcaccacatcgctctggttgcccctgatagactgctgatactgggcgcaaccagcatt
tcgacgcttctgggcaacgatccaccgaatttggctcacagtttacaggcaattaatcaa
aacccctcagtaatcgccgcattgcccgcgtgggatcttgaggcaatgctggcacggccc
gcgctcaaggcgggcttctggagccgctggctcgactggacggggactggaacgtag
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