Novosphingobium aromaticivorans: Saro_1787
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Entry
Saro_1787 CDS
T00322
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nar
Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nar03009
]
Saro_1787
Enzymes [BR:
nar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Saro_1787
Ribosome biogenesis [BR:
nar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Saro_1787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltrans_SAM
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ABD26227
UniProt:
Q2G7E6
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All DBs
Position
1885409..1886614
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AA seq
401 aa
AA seq
DB search
MNDAGLIVRVAAKGEGATADGRYAALAAPGDTLLPDGTLVHGPDHVDPACRHFPTCGGCQ
LQHLSEAALSAYVFDRVVGAAKGQGLEPAATTPAHLSPPRTRRRATLHAQAIGKRVVIGF
REQGSHKIVDMRECHVLAIELFALVGPLRALLEGWNDRKLAVDIELALSDQGASVGLKGL
AAEGLAKTEALLDFARDNGLARLTLDAGYGPEGVWEPEPVTVTLGGTPVALPPGAFLQAT
ADGEAALVGAAREWLSGAATVADLFSGLGTFAFALAGPATKVLAVEAAREPYMVCQAAAR
MNGRPVHALHRDLFRNPLRVEELDRFAAVLIDPPRAGAQEQVEQIAASKVARVVYVSCNP
ASWARDAVRLIAGGYRLAEVRPVGQFRWSTHVELASLFIRD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccggcctgatcgtgcgcgttgccgccaagggcgagggggcaactgccgac
ggacgctatgccgcgctggccgcgcctggcgatacgctcctgcccgacggtacgcttgtc
cacgggcccgaccacgtcgatcccgcttgccgccatttcccgacctgcggtggttgccag
ttgcagcacctgtccgaagccgcgctttctgcctatgtgttcgaccgcgtggtcggtgcg
gcgaaggggcagggcctcgaacctgccgccaccacgcccgcgcacctctcgccgccccgc
acgcgtcgtcgcgccacgctccatgcgcaggcaatcggcaagcgcgttgtcatcggtttt
cgcgaacagggttcgcacaagatcgtcgacatgcgcgaatgccatgtgctcgcgattgag
ctcttcgcgctggtcggcccgttgcgcgcgctgctggaaggctggaacgaccgcaagctc
gccgtcgacatcgagcttgcgctttccgaccagggggcgtccgtcgggctgaagggcctt
gcggcggaaggcctcgccaagaccgaggcgctgctcgatttcgcccgcgacaatggcctc
gcgcggttgacgctcgatgccggttacggtccggaaggcgtgtgggagccggaacctgtc
actgtgacgctcggcggaacgcccgtcgccctgcccccgggcgccttcctgcaggcgacg
gcggatggcgaggccgcgcttgtcggcgcggcgcgcgagtggttgtcgggtgctgcgacc
gtggccgaccttttctctggcctgggcacgtttgccttcgcgctggccggacccgcgacc
aaggtcctcgcggtcgaggccgcgcgcgagccatacatggtctgccaggcagcggcgcgg
atgaatggccgcccggtccatgcgcttcaccgcgacctgttccgcaatcccctgcgtgtc
gaggaactggaccgcttcgccgccgtgctgatcgacccgccccgtgccggcgcgcaggaa
caggtcgaacagatcgctgccagcaaggtggcgcgcgtggtctatgtcagttgcaatccg
gcaagctgggcgcgtgatgccgtgcgcctgatcgcaggtggctacaggctggcggaagtg
cgcccagttggccagttccggtggtcgacccacgtcgaactggccagcctgttcatccgc
gactga
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