Novosphingobium aromaticivorans: Saro_1890
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Entry
Saro_1890 CDS
T00322
Name
(GenBank) alpha amylase, catalytic region
Organism
nar
Novosphingobium aromaticivorans
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ABD26330
UniProt:
Q2G743
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Position
1999508..2001337
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AA seq
609 aa
AA seq
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MRRISLISALALVLSLGQPALADVPLAEVRARPAAGEVVYFLLPDRFDNGDRKNDLGGLK
GDRLKTGFDPSAKGFYHGGDIKGLLSRLDYLQDMGVTALWVAPVFRNKPVQGAPGQESAG
YHGYWVTDFTRIDPHFGSNADFKALVDAAHARGIKVYMDIIANHTADVIHYADGDYSYRN
RADWPYSRKGGLSGKAINQGFAGDEDSSAANFAKLTDPGAAYQPLIDPAERNVKVPAWLN
DPIYYHNRGNTTFTGEDSRFGDFAGLDDLFTEHPRVRAGMVEIYADWIRRFGIDGYRVDT
AKHVDPGFWQVFTPEIRKVAAEAGIPNFAVFAEIANGGSDPGTIARHTRRDGFPQVLDFA
FQEAVRDLVGKGKATRVLAETFDGDVLYEGGEAAALAMPTFLGNHDMGRFSTAVRQDRPG
ISDKELLDRVALAHVMLMTLRGSPVIYYGDEQGFVGDGGDQDAREDMFPSRTASYNDNRL
IGTASTTAADNFDEGHPLYRLIRDLAVLRKAHPALARGRQVTRTYSEGPGLFSVSRFDPE
TGTEYLIAFNTSDKPLRATSVIGASASGLEGLYGQCPLSVAAPGSVLLDLPAFGSVVCRV
ILSPESSVR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggatatccctgatttccgcgctcgctctggtcctgtccttggggcagccggcg
ttggccgacgtgccactggccgaagtgcgtgcgcgtcccgctgcaggcgaagtggtctat
ttcctgctgcccgaccggttcgataacggcgacaggaagaacgaccttggcgggctcaag
ggcgatcggctgaagaccgggttcgacccgtcggcaaaggggttttatcacggcggggac
atcaagggcctgctctcgcggctcgactacctccaggacatgggcgtgacggcgctgtgg
gtggcgccggtgttccgcaacaagccggtacagggcgcgcccgggcaggagagcgcgggg
tatcacggatactgggtaaccgatttcacccggatcgatccgcacttcggcagcaatgcc
gatttcaaggcgctggtcgacgctgcccatgctcgcggcatcaaggtctacatggacatc
atcgccaatcacacggcggacgtgatccactatgccgatggcgattactcataccgcaac
cgggccgactggccctattcgcgcaagggtggattgtccggcaaggcgatcaaccagggg
tttgcgggcgacgaggactcgagcgcggcgaactttgcgaagctgaccgatcccggcgcg
gcatatcagccgttgatcgacccggccgagcgaaacgtgaaggtcccggcctggctgaac
gatccgatctactaccataatcgcggcaacacgacgttcaccggcgaggacagccggttc
ggggactttgccggactggacgacctgttcaccgaacatccccgcgttcgtgccgggatg
gttgagatctatgccgactggatccgcaggttcggcatcgacggctaccgcgtcgatacg
gccaagcatgtcgatccgggcttctggcaagtgttcactccggaaattcgcaaggtcgcg
gcagaggccggcataccgaatttcgcggtgttcgctgaaatcgccaacggcggctcggac
cccggcacgatcgcgcgacacacccgccgcgacggctttccgcaagtgctcgacttcgcg
ttccaggaagcggtgcgggaccttgtcggcaagggtaaggcgacgcgcgtgctggcagag
acctttgacggcgacgtactctatgaaggtggcgaggcggcggcgctcgccatgccaact
ttcctcggcaaccacgacatgggccgtttctcgaccgcagtccggcaggaccgcccgggc
atttccgacaaggaactgctcgaccgcgtcgcgctggcgcacgtcatgctgatgaccctt
cgcggttcgccggtgatctactacggcgacgagcagggctttgtcggcgacggcggcgac
caggacgcgcgcgaggacatgttcccgagccgcacggccagctacaacgacaatcgcctg
atcgggacggccagcacgacggctgccgacaatttcgacgaggggcatcccctctatcgg
ctgatccgcgatcttgccgtactgcggaaggcgcatcccgcgctggcccgggggcggcag
gttacgcgaacgtattcggaagggcccggactgttttccgtctcccgcttcgatccggag
acgggtacggaatacctgatagcgttcaacacatcggacaagccacttcgtgcaaccagc
gtgattggcgcgtcggcaagcggtctcgaagggctctacggccaatgtccgttatcggtg
gcggcgccgggttcggtgctgctcgatctccccgcatttggcagcgtcgtctgtcgtgtc
atcctctccccggaatccagcgttcgatga
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