Novosphingobium aromaticivorans: Saro_1998
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Entry
Saro_1998 CDS
T00322
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nar
Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_1998
Enzymes [BR:
nar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Saro_1998
DNA repair and recombination proteins [BR:
nar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Saro_1998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABD26437
UniProt:
Q2G6T6
LinkDB
All DBs
Position
complement(2129827..2132808)
Genome browser
AA seq
993 aa
AA seq
DB search
MDDARARPRVWSIAAHRGFADALVAGLVPRYREDRFGLARLTLLLPSQRAVRTVTEAFVR
ASGAGLLLPRMTVVGDLDLDETLGPLLDPIGAGVDMPEAVDPVWRLLRIAGILRDELGED
APGEAALLRQARGIAQGIDRLLVEGVQPERMLDEAVIGIAAELSEHWQESTRLFARVFFR
WRAELEAIGKVDAPERRNRLLDHAARSWRERPPAHPVIAAGVTSASPVVARLLRTVADMP
EGGVVLPDLDLALDPEVWDALGSAGGPDGGLFERGDVVTHPQYHLKLLLNRMGIARDEVQ
PWHRAGLAAAPPERSRAISNLFLPPEASAAWVSLEARERRLAGVRVMETAHPEEEAQAIA
VLVREALKEPERRVAVITPDRSLAARIVAHLGRWNIGADDTAGRPLPQTAAGRLLLQLAE
VVAERAAPVPLLALLGHPLVQGGEGRPVWLERVRQLDLVLRGPRPGPGLPAIRQAVDKTA
KRFPALPDWWSGVEDLLFPLVPLEGAVPLDMALVALVEAGEALCGTALWAQADGRSLAAF
VERWRDAAGDAPAMVDVAELPSLLRDAMEEISVRPPWGGHPRLAIYGLLEARMSRADLVI
CGGLTEGTWPGSPAPDPLLAPAILRALGIPGAEFRIGLSAHDLAAALGAPEVVLSHARRD
ASGPVIPSRFLLRIHAMLGDQLRIEERAVELARALADADRIAPHPQPRPMPSAEQRRVPI
AVTALDRLRGDPYQFYASAILGLRSLDPIDADPTPAWKGTAVHDVLKAWHESGGVPGQLV
PLAERMFDEMSAHPFMRTMWKPRLVDALHWIEEETDRLAGEGREVLAVERKGEIVVDGIR
IHGRADRIDRLPDGTLAVVDYKTGKPPSGKMVAEGFALQLGLIGLIARGGGMDGVAGEPT
AFEYWSLGRNKERGFGYMKSPVKETARQTGIPREEFLDRTEDYLHEAIARWLLGSEPFTA
RLNPDLPGYSDYDQLMRLDEWQGRERKGGGGEP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcccgcgcccgcccgcgcgtctggtcgatcgcggcgcatcgcggctttgcc
gacgcgctcgtcgcgggtctcgtcccgcgttatcgcgaggatcgcttcggcctcgcccgg
ctgacgcttctgctgcccagccaacgtgccgtgcgcacggtgaccgaggcattcgtgcgt
gccagcggggctggcctgctgctgccgcgcatgaccgtcgtcggcgacctcgatcttgac
gagacgctggggccgctgctcgatcccataggggcgggcgtggacatgcccgaggctgtc
gacccggtttggcggctcctgcgcatagcgggcatcctgcgcgacgaactgggcgaggac
gcgccgggcgaggcggcgctgctgcggcaggcgcgcgggatcgcgcaagggatcgaccgc
ctgctcgtcgagggcgtgcagcccgaacgcatgctcgacgaggcggtgatcgggattgcc
gccgagctttcggagcattggcaggaaagcacccgtctgtttgcgcgggtgttcttccgc
tggcgcgcggagctggaagcgattggcaaggtcgatgcgccagagcggcgcaaccgcctg
ctcgaccacgccgcgcgaagctggcgcgagaggccgccggcgcatccggtcatcgcggcc
ggcgtgacttccgcctcgccagtggtggcaaggctgttgcgcacggttgccgacatgccc
gaaggaggcgtcgtcctccccgatctcgacctcgcgctcgacccggaggtctgggacgcg
ctggggagcgcgggtgggcctgacgggggcctgttcgagcgtggcgacgtggtgacgcac
ccgcagtaccacctgaagctcctgctcaaccggatgggcatcgcacgcgacgaagtgcag
ccctggcaccgcgctggtcttgccgccgccccgcccgaacgaagccgcgcgatctccaat
ctcttcctgccgccggaagccagcgccgcctgggtctcgcttgaggcgcgcgagcgccgt
ctggccggcgtcagggtcatggaaaccgcgcatccggaagaggaagcgcaggccatcgcc
gtccttgtccgcgaggcgctgaaagaaccggagcgccgcgttgcggtgataacccccgac
cgcagccttgccgcgcgcatcgtggcgcatcttggccggtggaacatcggcgccgacgac
accgccggccgtcctctgccgcagacggcggcgggaaggctgctgctgcaattggccgag
gtcgtggccgaacgcgcggcaccggtgccgctgctcgcgctgctcggccacccgctcgtg
cagggcggggaagggcgtccggtgtggctggagcgcgtgcgccagctcgatctggtcctg
cgcgggccgcgccctggtccgggcctgccggcaatccggcaggcggtggataaaacggcg
aaacgcttcccggcgctgcccgactggtggtcgggcgtcgaggacctgcttttcccgctc
gtcccgctcgaaggcgcggtccctctcgacatggccctcgtcgcgctggtcgaggcaggc
gaggcgctttgcggaactgccctgtgggcgcaggcagacgggcgcagccttgccgccttc
gtcgaacgctggcgcgatgcagcaggcgatgcgccggccatggtcgatgtcgcggaactg
ccctcgttgctgcgcgatgcgatggaggagatctctgtccgcccaccttggggcggccac
ccgcgcctcgcgatctacggcctgctcgaagcgcgaatgagccgtgcggacctcgtcatc
tgcggtgggctgaccgaaggcacctggccgggcagccccgcgcccgatccgttgctggcc
ccggcgatcctgcgcgcgctcggcattcccggcgcggagttccgcatcggcctgtcggct
catgaccttgccgctgcactgggcgcacccgaagtggtcctgagccacgcccggcgcgac
gcgagcggcccggtgatcccctctcgcttcctgctgcggatccacgcgatgctgggcgac
cagttgcgcatcgaggagcgcgcggtggagcttgccagggcgcttgcggacgctgaccgc
atcgccccgcatccgcaaccgcgcccgatgccttcggcagagcagcgtcgcgtccccata
gccgtcaccgcgctcgatcggctgcgcggcgatccctaccagttctatgcctcggcgatc
cttggcctgaggagcctcgatccgatcgatgccgatccgacgcccgcctggaagggcacg
gcggtccatgacgtgctcaaggcatggcacgagtccggcggcgtcccgggccagctcgtt
ccactggccgagcgcatgttcgacgagatgagcgcgcacccgttcatgcgcaccatgtgg
aagccgcgccttgtggacgcgctgcactggatcgaggaggagacggatcggcttgccggg
gaaggccgcgaagtcctcgccgtggaacgcaagggcgagatcgtggtcgacggcatccgc
atccacggtcgcgcggaccgtatcgaccggctgcccgacggtacgctcgcggtggtcgac
tacaagacgggaaaaccgccttcgggcaagatggtggccgagggcttcgccttgcagctc
ggcctgatcggcctgatcgcacgcggcggcggcatggacggtgtggcgggagagcccacg
gcgttcgaatactggtcgcttggccgcaacaaggaacgcggcttcggctacatgaagtct
ccggtgaaggagacggcgcgccagaccggcatcccgagggaagagtttctcgaccgcacg
gaggactacctgcacgaagccatagcgcgctggttgcttggatcggaacccttcaccgca
aggctcaatcccgaccttccgggctattctgactacgaccagctcatgcgcctcgatgaa
tggcagggccgtgagcgcaagggaggcggcggcgagccatga
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