Novosphingobium aromaticivorans: Saro_2337
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Entry
Saro_2337 CDS
T00322
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar00300
Lysine biosynthesis
nar00470
D-Amino acid metabolism
nar01100
Metabolic pathways
nar01110
Biosynthesis of secondary metabolites
nar01120
Microbial metabolism in diverse environments
nar01230
Biosynthesis of amino acids
Module
nar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Saro_2337
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Saro_2337
Enzymes [BR:
nar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Saro_2337
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABD26774
UniProt:
Q2G5U9
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All DBs
Position
complement(2484413..2485639)
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AA seq
408 aa
AA seq
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MKPLGPIPPGYETIDGELAVDGHKVTDLVMQAGGTPLFVYSRALLTRRVQDLRAAMPERL
AIHYAVKANPYIPLLSHMLELVDGFDIASGGELAIVRDAGIDPAMVSFAGPGKRDAELEA
AIAAAVTLNLESEGEATRALAIAGRLGIVPRLAIRVNPDFDLKGSGMKMGGGAKPFGIDA
ERVPALARKLISAGAEWRGFHIFAGSQALSADAIIETQAQTIGLAARLAEETGAPLPKCN
LGGGFGIPYFPGDEPVDVVAVGAALGDQFAALPDVLRDTAFCIELGRYLVGEAGIYLATV
IDRKESHGEVYLVTDGGLHHQLAASGNFGTVVRRNYPSAIATRFGAAVEEEASIVGCLCT
PLDRLADKGGFPRTDTGDLVVIFCAGAYGASASPAAFLGQGPAREMLV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgctcggcccgatcccgcccggatacgaaaccatcgacggcgaactggccgtg
gatggacacaaggttaccgatctcgtgatgcaggccggcggaacgccgctcttcgtctat
tcacgcgcgttgctgacccggcgggttcaggatctgcgagctgccatgccggagcggctg
gccatacattatgccgtaaaagcaaatccttatattccattattaagccacatgctggag
ctggttgatgggttcgacatcgcctctggcggcgaacttgccatcgtgcgcgacgccggg
atcgatccggccatggtcagcttcgcggggcccggcaagcgagacgccgaactcgaggcg
gcgattgcggcggccgttacgctcaaccttgaatccgaaggcgaggcgacgcgtgcgctg
gccattgccgggcggctggggatcgtcccccgtctcgcgatcagggtgaaccccgatttc
gatctcaagggatcgggcatgaaaatgggcggcggggcgaagccgttcggcatcgatgcg
gagcgcgtgcctgctctcgcccgcaagctgatttccgccggggcggagtggcggggcttc
cacatcttcgccggaagccaggctctgtcggccgacgcgatcattgaaacgcaggcgcag
acgatcgggctggccgcgcggctggccgaggagacgggcgcgcccttgccgaagtgcaat
ctcggcggcggcttcggcattccatatttcccgggtgacgagccggtcgacgtggttgcg
gtcggcgccgcgcttggcgaccagttcgcggcgctgcccgatgtcctccgggacacggca
ttctgcattgaactaggccgctatctcgttggcgaggcggggatttacctggcgaccgtg
atcgaccgcaaggaaagtcacggcgaggtctatctcgttaccgacggcggcctgcatcac
cagctcgccgcctcgggcaacttcggcaccgtggtgcgccgcaactatcccagcgccatc
gccacgcgcttcggcgcggcggtggaggaggaggcgagcatcgttggctgcctgtgcact
ccgcttgaccggctggccgacaagggcggctttccccggacagataccggcgatctggtg
gtaatcttctgtgccggtgcctatggggcgagcgccagtcccgcagcgttcctcgggcag
ggtccggcccgggaaatgcttgtctga
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