Novosphingobium aromaticivorans: Saro_2393
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Entry
Saro_2393 CDS
T00322
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Saro_2393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_2393
Enzymes [BR:
nar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Saro_2393
DNA repair and recombination proteins [BR:
nar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Saro_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
DUF2201_N
Zn_ribbon_6
MerR_1
AAA_22
HTH_5
MerR
AAA_19
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ABD26829
UniProt:
Q2G5P4
LinkDB
All DBs
Position
2558451..2560652
Genome browser
AA seq
733 aa
AA seq
DB search
MSDAPALFLDGNSTRVRCLIFNAALGPLDYRVPAGMTVEPGSVVIAPLGPRQIIGVVWDA
DRLPATEVPEGRLRPLLKVLPVPPLPAPLRRLIEWTADYYLAPLAAVARMALSSNAALQG
GSTVTEYRLTGKEPGRLTPQRLIALDLLQDQQATIRELSEIAGVSDAVLRGMVNAGLLEP
VVVDSDRPYPAADPHFAAPDLSEQQAEVAARFVASVRAREFHPFLLDGVTGSGKTETYFE
GVAAALEAGRQVLVLLPEIALTETFLKRFEARFGVPPVTWHSSLKSSERRRAWRSVSSGA
AQVVVGARSALFLPFADLGLIVVDEAHEISFKQDDGVRYNARDVAVMRAHFEKIPVILAS
ATPALESLQMAEAGRYERVVLPARFGGATMPHIQVVDLRVEQPERGHWIAPPLVRALKDR
LEKGEQSLLFLNRRGYAPLTLCRTCGYRFQCPNCSAWLVEHRLSRRLACHHCGHEVPPPD
ACPECHEPDCLVACGPGVERIADEVAEILPHARVALVTSDTLTSPAKAAEFVEMASNKAI
DVIVGTQLVTKGYHFPELTLVGVIDADMGLEGGDLRAAERTYQQVAQVAGRAGRGEKPGE
VLIQTRHPEAPVIEALASGDRDAFYEAEAEARRDAGAPPFGRWAAIIVSSEDEAEARDAA
RGIGGSAPRLDDVLILGPAPAPLSLLRGRYRYRLLINARRSTELQRVIREWLDPLRFPPG
VRVAVDIDPYSFV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcacccgcgctcttcctagacggaaattcgacccgcgtccgctgtttaatt
ttcaacgccgccctcggcccgctcgattaccgggtccccgccgggatgacggtcgagccc
ggcagcgtggtcattgcgccgctcggcccgcgccagatcatcggcgtggtctgggatgcc
gaccggctgcccgcgaccgaggttccggaaggccggttgcgccccctgctcaaggtcctg
ccggttccacccctgcccgctcccttgcgccgcctgatcgaatggaccgcggactattac
cttgcccccctcgcggcggtcgcgcgaatggccttgtcgagcaacgcggcgctccagggc
ggcagcaccgtcaccgaataccgcctgaccggcaaggagccgggccgcctcacgccgcag
cgcctgatcgcgctcgatctcctgcaggaccagcaggcgaccatccgcgaactgtccgaa
atcgccggcgtttccgacgccgttctgcgcggcatggtcaatgccggactgctcgaaccg
gtcgtcgtcgattcggaccgcccctatcctgcggccgatccccacttcgccgcgcccgac
ctctcggagcagcaggccgaagtcgccgccaggttcgtggcatcggtgcgcgcgcgcgaa
tttcaccccttcctgctcgatggcgtcaccgggtcgggcaagaccgagacctatttcgaa
ggcgtcgccgccgcgctcgaagccgggcgacaggttctcgtgctgcttcccgagatcgcg
ctgaccgaaaccttcctcaaacgcttcgaggcccgtttcggagtgccgcccgtcacctgg
cattcctcgctgaagtcgtccgagcggcgccgcgcgtggcgctcggtgtcgtcaggtgcc
gcacaggtcgtcgtcggcgcacgcagcgccctgttcctgccgttcgccgatcttggcctc
atcgtggtcgacgaagcccacgaaatctcgttcaagcaggacgacggcgtgcgctacaac
gcccgcgacgtggccgtcatgcgcgcccacttcgagaagatcccggtcatcctcgccagc
gccaccccagctctcgaaagcctccagatggccgaggcggggcgctacgaacgggtggtc
ctgcccgcccggttcggcggcgcgaccatgccccacatccaggtcgtcgacctgcgcgtg
gaacagcccgaacgcggccactggatcgcgccgccgctggtcagggccctgaaggaccgt
ctcgaaaagggcgagcaatcgctgctcttcctcaaccgccgcggctatgccccgctcacc
ttgtgccgcacctgcggctaccgcttccagtgcccgaactgctcggcctggctggtcgag
caccgcctctcgcgccgccttgcctgccaccactgcggtcacgaggtcccgccgcccgac
gcctgccccgaatgccacgaacccgactgcctcgtcgcctgcggcccaggggtagagcgc
attgccgacgaagtggccgagatcctgccccacgcccgcgtcgcgctggtcacctcggac
accctgaccagccccgccaaggccgccgaattcgtcgagatggccagcaacaaggccatc
gacgtgatcgtcggcacgcagctcgtgaccaagggctatcacttccccgaactcaccctc
gtcggcgtgatcgatgccgacatggggctcgagggcggagacctgcgcgcggcggagcgc
acctaccagcaggtcgcccaggtcgcgggccgcgccggtcgcggcgaaaagccgggcgaa
gtcctgatccagacccgccaccccgaagcccccgtgatcgaggctctcgccagcggcgac
cgcgacgccttctacgaggccgaggcagaggcccgccgcgatgccggcgcgccgcccttc
ggccgctgggccgcgatcatcgtgtcgagcgaggacgaggcggaagcgcgcgatgcggcg
cgcggcatcggcggctcggccccgcgcctcgacgacgtcctcatcctcggccccgcgccc
gccccgctctcgctcctgcggggccgctaccgctaccgcctgctgataaacgcccgccgc
tccaccgaactccagcgcgtgatccgcgaatggctcgatcccctgcgcttcccgccgggc
gtgcgcgtggcggtggacatagatccctacagcttcgtctga
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