Novosphingobium aromaticivorans: Saro_2482
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Entry
Saro_2482 CDS
T00322
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Saro_2482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nar03019
]
Saro_2482
03016 Transfer RNA biogenesis [BR:
nar03016
]
Saro_2482
Enzymes [BR:
nar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Saro_2482
Messenger RNA biogenesis [BR:
nar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Saro_2482
Transfer RNA biogenesis [BR:
nar03016
]
Prokaryotic type
tRNA degradation factors
Saro_2482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
BioW
Motif
Other DBs
NCBI-ProteinID:
ABD26918
UniProt:
Q2G5F5
LinkDB
All DBs
Position
complement(2683433..2685751)
Genome browser
AA seq
772 aa
AA seq
DB search
MFDVKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDIVAMIAASAALTISGVPFMGPIAAARVGFIEGEYVLNPKQDVALADGRLDLVV
AATDTAVMMVESEAKELSEDEMLGAVLFAHDEIKKVIGAIIQLAEKAAKDPWDIDLSDNT
ADIKKKLKDLVGKDVAAAYKLTDKSARSNALNEARAKAKAAFAEEGAQTQMVAMKTMKKV
EADIVRGAILKDGQRIDGRTTTQVRPIEAIVGFLPRTHGSSLFTRGETQAICTTTLGTKD
AEQMIDGLEGLRYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTKEE
FPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPVKRPVSGIAMGLILEGDKFAVLSD
ILGDEDHLGDMDFKVAGTSEGITTMQMDIKVAGITREIFEVALRQASEGRAHILGEMTKA
LGEARTELSAHAPRIETLQIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGLIKISSS
DLTQIEAAKNWILGIVEEAEVGKIYKGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVKEGQDVYVKVLEIDQRGKVRLSMRVVDQETGAELEDTRPPREPREPRGDRGDRG
DRGDRRGPRGDRGPRREGGDRGPRREGGDRPRRDRDDGPAPDHMPAFLKSDD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgtcaaaaccgtatcgctggagtggggcggaaagaccctcaccctcgaaacc
ggccgcattgcccgtcaggctgacggcgcggtcctcgccacttacggcgaaactgtggtc
ctttgcgcggtcaccgcggcaaagtcggtcaaggaaggccaggacttcttcccgctgacc
gtccactaccaggaaaagtattcggctgccggccgcattccgggcggcttcttcaagcgc
gaacgcggcgcgacggaaaaggaaacgctggtttcccgtctgatcgaccgtccggtccgc
ccgctgttccccgaaggtttctacaacgaaatcaacgtcatcgcccaggtcctgagctat
gacggcgagaccgaacccgatatcgtcgcgatgatcgccgcctcggccgcgctgaccatc
tcgggcgttccgttcatgggcccgatcgcggctgcccgcgtcggcttcatcgagggcgaa
tatgtcctcaacccgaagcaggacgtggcgctggccgatggccgtctcgacctcgtggtt
gctgcaaccgacaccgccgtgatgatggtggaatcggaagccaaggagctgagcgaagac
gaaatgctcggcgccgtgctgttcgcgcatgacgagatcaagaaggtcatcggcgcgatc
atccagcttgctgaaaaggctgccaaggacccctgggacatcgacctgtcggacaacacc
gccgacatcaagaagaagctcaaggacctggtcggcaaggacgttgccgctgcctacaag
ctgaccgacaagtcggcccgctccaacgccctgaacgaagcccgcgccaaggcgaaggcc
gcgttcgcggaagaaggcgcgcagacccagatggtcgcgatgaagacgatgaagaaggtg
gaagccgacatcgtccgtggcgcgatcctgaaggacggccagcgcatcgacggtcgcacc
accacgcaggttcgcccgatcgaagctatcgtaggcttcctgccgcgtacgcacggttcg
tcgctgttcacacgcggtgaaacgcaggcaatctgcacgaccacgctgggcaccaaggac
gccgagcagatgatcgacggcctcgaaggcctgcgctacgaaaacttcatgctccactac
aacttcccgccgtactcggtgggcgaagttggccgtttcggcgcgccgggccgtcgcgaa
gtgggccatggcaagctggcatggcgcgcgctgcacccggtgctgccgaccaaggaagag
ttcccctacacgatccgcatcctctcggacatcaccgagtcgaacggttcgtcctcgatg
gcgaccgtctgcggcggctgcctttcgatgatggacgcgggcgttccggtgaagcgtccg
gtttcgggcattgccatgggcctcatccttgaaggcgacaagttcgccgtcctgtccgac
atcctcggcgacgaggaccacctcggcgacatggacttcaaggtggccggcacctccgaa
ggcatcaccacgatgcagatggacatcaaggttgcgggcatcacgcgcgagatcttcgaa
gtcgcgctgcgtcaggcctcggaaggccgcgcgcacatccttggcgaaatgaccaaggct
ctgggcgaggcacgtaccgagctttcggcacatgctccgcgcatcgagacgctgcagatc
gacaagtcgaagatccgcgacgtgatcggcaccggcggcaaggtgatccgcgagatcgtg
gcgaccactggcgccaaggtcgacatcgacgacgaaggcctgatcaagatctcgtcttcg
gacctgacccagatcgaagcggccaagaactggatcctcggcatcgtcgaggaagcggaa
gtcggcaagatctacaagggcaaggtcgtcaacatcgtcgacttcggcgccttcgtgaac
ttcatgggcggcaaggacggtctcgtccacgtttccgaaatgaagaacgagcgcgtggaa
aagccgaccgatgtcgtgaaggaaggccaggacgtctacgtcaaggtcctcgagatcgac
cagcgcggcaaggtccgcctgtcgatgcgcgtcgtcgatcaggaaaccggtgcggaactg
gaagacacccgcccgccgcgcgaaccgcgtgaaccgcgcggtgatcgtggtgaccgtggg
gatcgcggcgaccgccgtggcccgcgcggcgatcgtggtccgcgtcgcgaaggcggcgac
cgtggtccgcgtcgtgaaggcggtgaccgtccgcgtcgcgaccgtgacgatggtccggct
cccgatcacatgccggcgttcctcaagtccgacgactga
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