Novosphingobium aromaticivorans: Saro_3045
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Entry
Saro_3045 CDS
T00322
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nar
Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nar03021
]
Saro_3045
Transcription machinery [BR:
nar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Saro_3045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
DUF1870
Caudo_TAP
CR4_N
Motif
Other DBs
NCBI-ProteinID:
ABD27480
UniProt:
Q2G3U3
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All DBs
Position
complement(3260186..3261085)
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AA seq
299 aa
AA seq
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MSEEKTALTVPALGGEASLNRYLSEIRKFPVLTAEQEYMLAKRFQEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASMQEFI
LRSWSLVKMGTTAAQKKLFFNLRRMKKNLEAFEDSDLHPDDVRKIATDLGVPEQEVVNMN
RRMMMGGDASLNVSMREDGEGSWQDWLTDDRPLQDETVADAEEAQYRHELLVEAMESLNE
RERHILTDRRLIDDPKTLEELSQVYNVSRERVRQIEVRAFEKLQKAIQRIAVERKLLPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggaaaagaccgcgctgaccgtccccgcgctgggtggggaagccagcctcaac
cgctatctctcggaaatccgcaagtttcccgtgctgacggcagagcaggaatacatgctc
gccaagcgctttcaggaacatcaggaccccgaggccgccgcacaactggtgacgagccac
ctgcggctcgtggcgaagatcgccatgggctatcgcggctatggcctgccggtgagcgag
ctgatcagcgagggcaacatcggcctgatgcagggcgtcaagaagttcgagccggaccgg
ggtttccgtctggcgacttacgcgatgtggtggatcaaggcctcgatgcaggaattcatc
ctgcgcagctggtcgctcgtgaagatgggcaccaccgccgcgcagaagaagctgttcttc
aacctgcggcgaatgaagaagaacctcgaggctttcgaggattccgaccttcatcccgac
gacgtgaggaagatcgcgaccgacctcggcgtacccgagcaggaagtggtcaacatgaac
cggcgcatgatgatgggcggcgatgcgtcgctcaacgtctcgatgcgcgaggacggcgaa
ggatcgtggcaggactggttgacggacgaccgtccgctccaggatgaaaccgtggccgac
gccgaggaagcgcagtatcgccacgaactgctggtcgaggcgatggaaagcctcaacgag
cgcgagcgccacatcctgaccgaccgcaggctgatcgacgatcccaagacgctcgaggaa
ctgagccaggtctacaacgtcagccgcgaacgcgtgcgtcagatcgaggtgcgcgccttc
gagaagctgcagaaggcgatccagcgcatcgcggtggagcgcaagctcctgccggcataa
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