Novosphingobium aromaticivorans: Saro_3046
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Entry
Saro_3046 CDS
T00322
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
nar
Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nar03009
]
Saro_3046
Enzymes [BR:
nar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Saro_3046
Ribosome biogenesis [BR:
nar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Saro_3046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABD27481
UniProt:
Q2G3U2
LinkDB
All DBs
Position
complement(3261197..3262195)
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AA seq
332 aa
AA seq
DB search
MLPIWPGMGGTDSIISGQVPAGGQRLDKALADASGLSRERVKALLGEGRVRLGGAVVSQA
SLKPAEGTPFEIHVPEAAPAEAIAQAIPLVVVHEDDALIVVDKPAGLVVHPAAGNPDGTL
VNALLHHCRGQLSGIGGVARPGIVHRIDKDTSGLLVVAKTDAAHEGLARQFADHSITRAY
KCVTAGVPMPPSGTVRGAIARSSHDRKKMALVDDGRGKHAVTHFRTLAALQGAALVECRL
ETGRTHQVRVHLASIGHPLLGDPVYGRTPSRLRPLLQRLGFHRQALHAAELGFIHPVTGA
PLHFASPTPVDMRELIVELCAEGQDAKLMAMV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgctacccatatggccgggaatggggggcaccgacagcatcatttccggacaggtcccc
gcaggtggccagagactcgacaaggccctggccgacgccagcggcctctcgcgcgagcgg
gtcaaggctctgcttggtgaagggcgtgtccggctgggtggggcggtagtctcgcaggcc
tcgctcaagcccgccgagggcacaccgttcgaaatccacgtacccgaggcggcccccgcc
gaagccatcgcgcaggcaatcccgctggtggtcgtccacgaggacgacgccctgatcgtg
gtcgacaagcctgcgggacttgtggtccatccggctgcgggcaaccccgacgggacgctg
gtcaacgccctgctgcatcactgccgtgggcagctttccggcattggcggggtggcccgg
ccggggatcgtccatcgcatcgacaaggatacttcgggcttgctggtcgtggcgaagacc
gacgccgcccacgagggactggcacggcagttcgccgatcattcgatcacgcgtgcgtac
aagtgcgtgaccgcaggcgtgccgatgccgccttctggcacggtgcgcggggcgatcgcg
cgatcgagccatgatcgcaagaagatggcgctggtcgatgacgggcgcgggaagcatgcg
gtcacccatttccgaacgctcgcagcgcttcagggcgccgcgcttgtcgagtgccggctg
gagacggggcgaacccaccaggtgcgcgttcaccttgcgtcaatcggccatccgctattg
ggtgatccggtctatggacgcacaccttcacgcctcaggccgctgctccagcggctcggg
tttcaccgtcaggcgcttcacgcggcggagctgggattcatccaccccgtcaccggcgca
ccgctccacttcgccagtccgacgcccgtcgacatgcgggaactcatcgtcgaactgtgc
gctgaaggtcaggatgcaaagctcatggcgatggtgtag
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