Novosphingobium aromaticivorans: Saro_3256
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Entry
Saro_3256 CDS
T00322
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Saro_3256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_3256
Enzymes [BR:
nar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Saro_3256
DNA repair and recombination proteins [BR:
nar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Saro_3256
Prokaryotic type
Saro_3256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD27691
UniProt:
Q2G382
LinkDB
All DBs
Position
3476471..3477151
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AA seq
226 aa
AA seq
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MNLSLPADWRASLEPLLASPPLRALGDFLDAEERAGKTIYPPATQRLAALEMTPLDNVRI
VILGQDPYHGPGQAHGLAFSVQDGVKVPPSLANIYKELEADLGLPRPPHGNLARWARQGV
LLLNSALTVEAASAGSHQGKGWEALTDAAIAAVAARDVPTVFMLWGSHAQKKAARVARLA
SGPHLVLEAPHPSPLSAHKGFLGCRHFSKANAFLEAHGRRAVDWRI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctccttgcccgcagactggcgcgccagcctcgaacccctgcttgcctcgccc
cccttgcgcgcactgggcgacttcctcgacgcggaggagcgggccggcaagacgatctac
cctcccgcgacgcagcgcctcgccgctctggagatgaccccgctggacaacgtgcgcatc
gtgatcctggggcaggacccctaccacggccccggccaggcgcacggcctcgccttctcg
gtccaggacggggtcaaggtcccgccgagccttgccaacatctacaaggaactggaggcc
gacctcggcctgccccgcccgccccacggcaacctcgcacggtgggcgcggcagggagtg
ctgctgctcaacagcgcactgacggtcgaggcggcaagcgccggctcgcaccagggcaag
ggctgggaggccctgaccgacgccgccatcgccgccgtcgccgcgcgcgacgtaccgacg
gtgttcatgctctggggcagccacgcgcagaagaaggcggcgcgcgtcgcccgcctggcc
agcggcccccacctcgtgctcgaagccccgcaccccagcccgctctcggcgcacaagggg
ttcctcggatgccgccatttcagcaaggccaacgccttcctcgaggcgcacgggcggcgc
gcggtggactggcggatctga
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