KEGG   Novosphingobium aromaticivorans: Saro_3312
Entry
Saro_3312         CDS       T00322                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nar  Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:nar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nar03400]
    Saro_3312
Enzymes [BR:nar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Saro_3312
    5.6.2.6  RNA 3'-5' helicase
     Saro_3312
DNA repair and recombination proteins [BR:nar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Saro_3312
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ABD27747
UniProt: Q2G326
LinkDB
Position
complement(3532565..3534979)
AA seq 804 aa
MTLPATIADWFAGRGWRVRRHQIEMLDAARAGEHALLVADTGAGKTLAGFLPTLVDFASA
TPPGDGLHTLYVSPLKALAHDVQRNLLAPVEEIGLPIRVETRSGDTPSDRKARQRAKPPH
VLLTTPESLSLLLSYPEAATMFAGLRRVIVDEVHAFATGKRGDLLALSLARLQAIAPGMR
RAALSATVADPRDFCAWLSPGGDPGAVRLVDGEPGAKPELSILNPEDQRVPWGGHAAAWA
VPQLYDEIRRNRTTLVFTNTRFLAEYIFQLLWDVNEDKLPIGIHHGSLSKEARRKVEGAM
ARGELRALVCTASLDLGVDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDCASRALLVPG
NRFEFLEAFAAQEAVEEGRRDGEDFRPGGLDVLAQHVMACACAGPFDEKALHAEVRSAHP
YRWVDEAQWNRVLEFVATGGYALRAYDRFKRIVRDRHGTWRLTHPEHAARHRLNAGIIVD
AEMLDVRFRNGRSLGRVEENFGASLSPGDTFRFAGMDLEVEGVRDLELIVRAAKSAGQIP
SYMGARLPLTTHLSERVRALMVDRAGWSRFPDDVREWLEMQDWRSRLPGPGTLLAESFPY
EGRHYTVYYTFEGWNANQSLGMLITRRMNERGLMPLGFVANDYSLAVWGARPVDDPAPLL
SPDILAHEFVEWVQESHLLRRAFREVAVISGLVERQHPGKRKSGRQVTFSTDLIYDVLRK
YEPDHLLIQAAWADARARMTDVGRLGDLLDRAQGQLVHVELDRVTPLAVPVLVMIGRETL
PAGAADDELLMEAETLAAAAMRAD
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgacgcttcccgccaccattgcagactggttcgccggccgcggctggcgggtgcgccgc
catcagatcgagatgctcgatgccgcgcgggcgggcgaacatgccttgctggttgccgat
accggtgcaggcaagacgctggcgggctttctccccacgctcgtcgacttcgcttctgcc
accccgcccggagacgggctgcacacgctctacgtctcgccgctcaaggcgcttgcgcac
gacgtgcagcgcaatctcctcgccccggtcgaggagatcgggctgccgatccgcgtcgag
acgcgcagcggcgatacgccgtccgatcgcaaggcccggcagcgggcaaagccgccccac
gtgctgctgaccacgcccgaatcgctttcgctcctgctgagctatcccgaggcggcgacg
atgttcgcgggtctcaggcgagtgatcgtcgacgaggtccatgcctttgccacgggcaag
cgcggcgatcttctggcgctgtcgctggcgcggttgcaggccatcgccccgggcatgcgg
cgcgcggcgctttcggccaccgtggcggacccgcgcgacttctgcgcatggctctcgccc
gggggcgatcccggcgcggtcaggcttgtcgatggcgaaccgggcgcgaagcccgagctt
tcgattctcaacccggaggatcagcgcgtgccctggggcggtcatgctgccgcatgggcc
gtgccccagctctacgacgagatccggcgcaaccgcacaaccctggtcttcaccaacacg
cgcttccttgccgaatacatcttccagctcctgtgggacgtgaacgaggacaagctgccc
atcggcatccaccacggctcgctgtcgaaggaggcgcgccgcaaggtcgagggtgcgatg
gcacgcggcgaactgcgcgcgctggtgtgcacggccagcctcgacctcggcgtcgactgg
ggcgatgtcgaccttgtcgtgcagatgggtgcgcccaagggatcttcgcgtctgctgcaa
cgcatcgggcgcgccaaccaccggctcgattgcgccagccgggctctgctcgtgccggga
aaccgctttgaattcctcgaagccttcgccgcgcaggaagcggtggaggagggcaggcgc
gacggtgaggacttccgtccgggcgggctcgacgttcttgcccagcatgtcatggcctgc
gcctgcgcggggccgttcgacgagaaggcgctccacgccgaagtacgatcggcccatccc
tatcgctgggtggacgaggcgcagtggaaccgcgtgctcgaattcgtcgccaccggcggc
tatgcgctgcgggcctacgaccgcttcaagcgtatcgtgcgcgaccggcatggtacctgg
cggctgacccaccccgaacatgccgcgcggcacaggctcaatgccgggatcatcgtcgat
gccgaaatgctcgacgtgcgcttccgcaacgggcgctcgctcgggcgcgtggaagagaac
ttcggcgccagcctgtcccccggcgacaccttccgctttgccggcatggatctggaggtg
gagggtgtgcgcgacctcgagctgatcgtgcgcgcggccaagtccgccgggcagatcccc
agctacatgggcgcgcgcctgccgctgaccacgcatttgtcggaacgcgtgcgtgcgcta
atggtcgaccgtgcgggctggtcgcgcttcccggatgacgtgcgcgagtggctggagatg
caggactggcgcagtcgcctgcccggccccgggacattgctggccgaaagctttccctac
gaagggcggcactacacggtttactataccttcgagggctggaacgcgaatcagtcgctc
ggcatgctgatcacgcgccggatgaacgagcgcgggctgatgccgctgggcttcgttgcc
aacgactattcgctcgccgtctggggggcacggccggtggacgaccccgcgcccctgctt
tcgcccgacatactcgcgcacgaattcgtcgaatgggtgcaggaatcgcacctcctgcgc
cgggccttccgcgaagtcgcggtgatctccggtcttgtcgagcgccagcacccgggcaag
cgcaagtccgggcggcaggtcaccttctcgaccgacctcatctacgacgtgttgcgcaag
tacgaacccgaccatctgctgatccaggcggcctgggccgacgcgcgtgcccgcatgacc
gacgtgggccgcctcggcgacctgctggaccgcgcgcagggccagctcgtccacgtcgaa
ctggaccgcgtcaccccgcttgccgtcccggtgctggtgatgatcggtcgcgaaaccttg
cctgcgggagcagccgacgacgaactgctgatggaagcggaaacgctggcggcggcggca
atgcgggcggactga

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