Novosphingobium aromaticivorans: Saro_3839
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Entry
Saro_3839 CDS
T00322
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
nar
Novosphingobium aromaticivorans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ABP64085
UniProt:
A4XDS4
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Position
pNL1:complement(6095..7735)
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AA seq
546 aa
AA seq
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MKTLPGYADIASKLQFSPEMGRIWHDGERCVLLSQAALASWRSRLVAELGHEAASRFFWG
VGFAEGARCAIGAKKLRPDGDYLEAFAVGPQAHALTGFGWTQIEILENDSSRGHFEGRFR
VHDSIEAAIHLSATGYSTDPVCWMQTGFASGFATTFAGQPIIMREVECAGRGDAACVLHA
KPKPEWDQLDNLELAATPLVLPETRHDGGQTVIGISAGFLSAKTMIERTASSNATLLLMG
ETGVGKEVLAKLAHRLSMREAEPFIALNCAAIPEGLIESELFGVAKGAYTGAVAARPGRF
ELANGGTLFLDEISTLSPLAQSKILRAVQEGEFERVGDTRTIKVDVRLIAASNVELNEAV
REGTFRADLFYRISTLPVRVPPLRQRREDIPVLLEHFRLHYAMRHGRTVSGFTPRAINAL
LVYDFPGNVRELERMVERAVLLADDGRAIDVRHLFLETDGLELKPTMGMTNDGRISAVDN
VGDRAGLVRQMLDLIVDGGGSLLEMEGLVIREALDASGGNVARAARTLGFTRRQLALRLE
KLEIQE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacttccaggctacgccgacattgccagcaagctgcagttctcaccggaaatg
ggccggatctggcacgatggtgaacgctgcgtactgctcagccaagcggctctggccagc
tggcgcagccgcctagttgccgaattggggcacgaagcggccagccggttcttctggggt
gtcggttttgccgaaggcgcacggtgcgcgatcggcgcgaaaaaattacgcccggatggt
gattatcttgaagcattcgcggtcggaccgcaggcgcacgccttgaccgggtttggctgg
acccagatcgaaatcctggaaaatgattcctcgcgagggcatttcgaaggccggttcagg
gtccacgattcgatcgaggcggcgatccatctcagcgcgaccgggtacagcactgacccg
gtgtgctggatgcagactggctttgccagcggctttgccacaaccttcgcgggacaaccg
atcatcatgcgcgaagtggaatgtgcggggcgaggcgatgccgcctgcgtacttcacgcc
aaaccaaaacccgaatgggatcagttggacaacctcgaattggccgcgacgccgctggtc
ctgcccgaaacgcggcatgatgggggccaaacggtgattgggatctcggcagggttcctc
tcagccaagaccatgatcgaacgcaccgcgtcgagcaatgcgacgctgctgttaatgggc
gagaccggggtcggcaaggaagtgctggccaagctcgctcatcggctgagcatgcgcgag
gcggagccgttcatcgcgctcaactgcgcggcgatccccgaggggttgatcgaatcggag
ctgttcggcgtggccaagggggcctatactggcgcggttgccgcccggcccggtcggttc
gagctggccaatggcggcacgctgttcctggacgagatttcgacactgtcgccacttgca
caatcgaagattctgcgcgctgtccaggaaggtgagttcgagcgggtcggcgatacgcgg
acgatcaaggtggatgtccgattgatcgcagcatccaatgtggaacttaacgaggcggtg
cgggaaggcacgtttcgtgccgacttgttctaccggatatcgactttgccggtccgggtg
ccgccgctgcgccagcgccgcgaggacattccggtgctgctggaacacttccgtctgcat
tatgccatgcgccatggccgaacggtatcgggcttcaccccgcgggcgatcaacgcgctg
ctggtgtacgatttccccggtaatgtgcgcgaactcgagcgaatggtggaacgtgccgtg
ctgctggcggacgacgggcgagcgatcgacgtcaggcacctgttcctcgaaaccgacggt
ctcgaattgaagccgacgatgggcatgaccaacgatggcaggatcagcgccgttgacaat
gtcggcgatcgcgccggcttggtgcgccagatgctggatctgatcgtcgatgggggcgga
agcctgctggagatggaagggctggtgatccgcgaggcccttgatgcgagtgggggcaac
gttgcgcgcgcggcgcgcaccttaggctttacccgtcggcagctcgccttgcgtcttgaa
aagttggaaatccaggaataa
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