Natrialbaceae archaeon AArc-T1-2: QQ977_03600
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Entry
QQ977_03600 CDS
T09282
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nara
Natrialbaceae archaeon AArc-T1-2
Pathway
nara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQ977_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nara03019
]
QQ977_03600
03016 Transfer RNA biogenesis [BR:
nara03016
]
QQ977_03600
Enzymes [BR:
nara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QQ977_03600
Messenger RNA biogenesis [BR:
nara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QQ977_03600
Transfer RNA biogenesis [BR:
nara03016
]
Prokaryotic type
tRNA degradation factors
QQ977_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
WIV67826
LinkDB
All DBs
Position
complement(708702..710003)
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AA seq
433 aa
AA seq
DB search
MSDDTQADAGTAEGQGPVEISEELARHLENKREELFEKFEIRDEFPAGVLEEAEDRTEDV
GSEIDAEVDDRRDLRELTTWTTDPIDAQDFDDALSIEEREEEYVLWVHIADVTHYVHPES
AMWEEAVERGNTVYLPGYTIHMLPPVLAETVCSLVPNEDRLAHTVEMHLDKEELTYEEID
IYKSVIRSDERLTYTQAENRLDDPDAPLHEENVLVYDLAEQMHEQRKADGSLVLNPARDR
AHTIIEECMLKANKAVTHELMWSRGVEAMYRVHPQPSPDEWSEALQEIQELDGVSIPGEA
WDDPRKAVNATLEEAPGRQLDKIQWAVMKVMPRARYMNDPFGGHHALNFEIYGHFTSPIR
RLSDLINHWIVYKNEVPEDLVALCDRASDKQKDAEQCEREYKNFLQEVGLDPMAVNNRGI
EIVDDEDAEKTLE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacacacaggccgacgccgggacggccgaagggcagggtcccgtcgaaatc
tcggaagagcttgcccgccacctcgagaacaaacgcgaggaactgttcgagaagttcgag
atccgcgacgagtttcccgcgggcgttctcgaggaagccgaggaccgaaccgaagacgtc
ggctcggagatcgacgccgaagtcgacgaccgtcgggacttacgagagctgacgacgtgg
acgacggacccgatcgacgcccaggacttcgacgacgcgctctcgatcgaagagcgcgag
gaggagtacgtcctctgggtccacatcgccgacgtcacccactacgtccatcccgagtcg
gcgatgtgggaggaggccgtcgagcgcgggaacacggtctatctgcccggctacacgatc
cacatgctgccgccggtgctcgcggagacggtctgttcgctcgttcccaacgaggacagg
ctcgcccacaccgtcgagatgcacctcgacaaagaggagctcacctacgaggagatagac
atctacaagtccgtcatccgctcggacgaacgactcacctacacccaggccgagaaccga
ctcgacgaccccgatgcgcccttacacgaggagaacgtcctcgtctacgatctcgccgag
cagatgcacgaacagcgcaaggcggacggctcgctcgtgttgaaccccgcgcgggaccgt
gcccacacgatcatcgaggagtgcatgctgaaagcgaacaaggccgtcactcacgagttg
atgtggagccgtggcgtcgaggcgatgtaccgcgtccacccccagccaagccccgacgag
tggtccgaggcgctccaggagatccaggagctcgacggcgtctcgatccccggcgaggcc
tgggacgacccccggaaagcggtcaacgccaccctcgaggaggcccccggccgccagctc
gataagatccagtgggccgtgatgaaggtgatgccccgggcccggtacatgaacgacccc
ttcggcggtcaccacgcgctgaacttcgagatctacggccacttcacgagtcccattcgc
cgcctgtcggacctgatcaaccactggatcgtctacaaaaacgaggttcccgaagacctc
gtggcgctgtgtgatcgcgcgagcgacaagcaaaaagacgccgaacagtgcgagcgcgag
tacaagaacttcctccaggaggtcggcctcgacccgatggcggtgaacaaccgcggcatc
gagatcgtcgacgacgaggacgcagagaagacgctggagtag
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