Candidatus Nitrotoga arctica: NTG6680_0407
Help
Entry
NTG6680_0407 CDS
T08244
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc00541
Biosynthesis of various nucleotide sugars
narc01100
Metabolic pathways
narc01250
Biosynthesis of nucleotide sugars
Module
narc_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NTG6680_0407 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
narc01005
]
NTG6680_0407 (kdsB)
Enzymes [BR:
narc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NTG6680_0407 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
narc01005
]
Lipid A
NTG6680_0407 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
CAG9931660
LinkDB
All DBs
Position
Ntg6680:complement(419427..420224)
Genome browser
AA seq
265 aa
AA seq
DB search
MIAFHVVIPARFASTRLPGKALLPIGGKPMVVRVAEQSAQSGAQQIWIATDHQSIIAAVH
EYGFKACLTHAHHTSGTDRIAEVVEQLGWPDDTIVVNVQGDEPLMPPALISAVAQHLHDH
PECAIATACHPIHDEEAMRNPNIVKVVLDKQSNALYFSRAQIPYPRDALTSGTSQPENLT
VLRHIGIYAYRAGFLRAFRKLAPAAMEQIEALEQLRALWHGYKIGVTVSTDVPPSGVDTE
QDLHAARKLFDSKRIINDQINGAPS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatagcctttcatgtcgtcattccggcacgtttcgcctccacccgtctgccgggtaag
gcgttattgccgattggcggcaaaccgatggtggtgcgagtggccgagcaatctgctcag
agcggcgcgcagcaaatctggattgccaccgatcatcaatccatcatagctgccgtgcat
gaatatggctttaaggcctgcctgacccacgcccaccacaccagtggcaccgaccgtatt
gccgaagtggtggaacaacttggatggcccgacgacactattgtagtcaacgtacagggc
gacgaacccctcatgccacccgcactgatcagcgccgtagcacaacacctgcacgatcac
ccagagtgcgccattgccaccgcctgccatcccatccatgatgaagaggccatgcgcaat
cccaacattgtcaaagtggtgctggataaacagagcaatgccctgtatttcagtcgcgcg
cagattccttatccgcgcgatgcgctcacatctggcacatcacagccggaaaatcttacg
gtattacgccacatcggcatttatgcttaccgtgccggctttctgcgtgcctttcgcaaa
cttgcacctgccgccatggaacaaattgaggcgctggaacaactacgcgccctgtggcac
ggttacaagattggagtaaccgttagcacagacgtaccacccagcggagttgataccgaa
caagacctgcacgctgcccgcaagctgtttgacagcaagcgtataatcaacgaccaaata
aacggagcaccatcatga
DBGET
integrated database retrieval system
