Candidatus Nitrotoga arctica: NTG6680_0466
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Entry
NTG6680_0466 CDS
T08244
Symbol
rhsD
Name
(GenBank) Type IV secretion protein Rhs
Organism
narc
Candidatus Nitrotoga arctica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
CAG9931719
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All DBs
Position
Ntg6680:complement(477154..481329)
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AA seq
1391 aa
AA seq
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MPLQNIPPHRLTILALAVLSIIPILPSQAYAVACVDCAGSWFQEYQASDLGGTCTGSDSN
SDNNGYDTSSSSYDDTSSSSYSYTSSSSYSYPSSSSYSYPSSSSYSYPSSSSYSYPSSSS
YNYPFSSDYDDPFSWNYDDPFSWNYGDTFSLNYGDFSGSDSFAGDPINTSIGNVVESARD
YRSSGPFPVNFSRTYNSLPMLVPGFVNSLGGNWRGTYDANIVIHDGDVYVYRPDGKAAKF
TLVNGAYASASDIVATLMPVQAGGQPAGWIYTTAVHTVETYDVNGRLKSIANRNGLIQTL
AYDGNGSLTSVTDPLGRVLQFAYDSSNRLVTLTGPDLATIRYAYDANNNLTSVTYPDSTT
TGYQYQNSAFPSLLTGRVDAKGVVVSTWTYDNQGRAIGNQLANGVAAVTVRYNQDSTDVT
DVRGVTRTRQFQRIGSTKKLVSMTVACSDCDAELLRSVSHDSNGFATGSTDFSGLTIQNT
LDSRGLALTETVAAGTPLARTIKYTWHPIFPNLTSIVLPNNQSSQFEYDDKGNLTKRTMT
ADGVSRVSTYQYNAAGQLIHVTNPGADGKNVTTLTYDKQGNLASVTNALNQSIRFTQYDA
NGRLLSLTDPRGRSTTFTYDANGRQTSITTGALVSKFTYNANGQRSSVSLANGSILDYAY
DDAHRLTDVIDTRDTNLHLTRDAAGSVTQSTMTVASGAVARSRAFAYDQRGRLLQVAGNN
GQKSAYAYDRTGHLLSVSDAINRTSQAQYDALQRMTQSIDAKGNATAYGYDTNDNLAGVT
SPRGLATQYQRNGFGQVIKLISPDTGQTSYQYDTAGKLIVATDARGKTARMRYDVLGRPT
QISLAEDQQVSLTYDQGPYGIGRLTAVNNPTSGNSYQYDVNGRITFQRQTIGNVSEEVKY
DHTEIGQLTSMHYPSGTTVQYTYAADGKAVSLNINGTSLLSQIKYQADDQIGQWTWGNTR
VATRSFDADGRLTAFSKAGSSATIAYDNADRIINMADSSGPSRRQGFAYDNNDALTNYTA
NATTQSYQYDEDGNRTAQGNGGAIVNYAYASGSNRLLKLTGSQKATLQYDATGNIVADGT
NRYTYDTLGRLVQVSNAAGSTRYLFDPLGQRVAKLNGSGKDGEDDDRKKEASNEDGKTAT
TYFTYDTAGHLIGEYNRQRSQSTEYVWLGNAPVAVLNKNGNAPAQLYYVHTDHLGTPRQV
THSATNAVVWEWFGEPFGTSVPDEDPGHTGKKFSMNLRYAGQYYDKESSLFHNGFRDYNP
KIGRYVQSDPIGLAGGINTYGYVGGNPINRVDPTGLYYFQQPWQANDPIVGRENTWIVPG
GAISSFIENYVPAGRTLAEIHDPLVGVLTSAGLPDIIANIPTMPLAYIAASYLELRRFLG
FTEQPKQMCTR
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcagaacattccgccccatcgtttaacaattcttgcactcgccgttctctcc
attattcccatcctcccaagccaagcttatgccgtggcctgcgttgactgtgcgggcagc
tggtttcaggaataccaagcttctgatttgggtggaacttgcacgggttcggacagcaat
tcagacaacaatggatacgacacgtcaagttcgagttatgacgacacatcaagctcgagt
tatagctacacatcaagctcgagttatagctacccatcaagctcgagttatagctaccca
tcaagctcgagttatagctacccatcaagctcgagttatagctacccatcaagctcgagt
tataactacccattcagctcggattatgacgaccccttcagctggaattatgatgacccc
ttcagctggaattatggcgacacattcagcttgaattatggcgacttctcgggttccgat
agttttgcgggcgatccaatcaacacttccatcggcaatgtcgttgaatcagcacgcgac
tatcgaagcagcggaccattcccagtcaatttttccaggacttacaatagcctgcccatg
ctggttcccggctttgtcaacagcctgggcgggaactggcgtggcacctacgatgccaat
atcgttattcatgatggcgatgtctatgtgtatcgtcctgatggcaaggcagctaaattc
accttggtcaatggcgcttatgcgtcggcaagcgacatcgttgccacattgatgcctgtg
caggctggaggacaacccgcgggatggatttatacgacagcagtccacacagtcgaaaca
tatgatgtcaatggccgtttgaagtccattgcaaacagaaacggcttgatccaaacattg
gcgtacgacggcaatggctcgctcaccagcgtaactgatcctctcggacgcgtgctgcaa
tttgcctatgattcttcaaatcggctggtgacattgaccggaccggatctcgccacgatt
cgatatgcttacgatgcgaataacaacctgacctcagtcacctatccagacagcacgacg
accggataccaatatcaaaatagcgcatttccaagcctgctgaccggtcgagtcgatgcg
aaaggtgtggtcgtctcgacctggacctatgacaatcaaggtcgcgcgatcggcaaccag
ttggcaaacggcgtagcagctgtcactgttaggtataaccaggacagcaccgacgttacc
gatgtccgtggcgtgacccgcacgcgccagtttcaacgtattggcagcaccaagaaactc
gtcagcatgacagtagcgtgcagtgactgcgatgctgaactattgcgcagtgtcagccat
gatagcaacggatttgccacgggcagcactgacttcagtggtctcactatccagaacacg
ctcgattcgcgcggcttggcgttgactgagacagtcgcagcgggaacaccactggcgcgc
accatcaagtacacctggcatcccatatttccaaacctgaccagcattgttttgccgaac
aaccagagctctcagtttgaatatgacgacaaagggaatctcaccaagcggacgatgacg
gccgatggcgtaagtagagtttcaacgtaccaatataacgctgccggacaattgatacac
gtaacaaaccccggcgccgatggcaaaaatgtcacgacattgacctacgataagcagggc
aatctcgccagcgtcacgaatgcgttaaatcaatccatacgtttcacccaatacgatgcc
aatggccgtttgctcagcctgaccgacccgcgtggccgttctacaaccttcacatacgat
gccaatggccgccagacgagcatcacgaccggcgctttggtcagcaagtttacctacaac
gctaacggccaacgctccagcgtctcgctagctaacggcagcatacttgactatgcttat
gacgacgcacaccgtttgaccgatgtgattgatacacgagacaccaacctgcatttaacc
cgcgatgcagccggaagcgtcacgcaaagcacgatgactgttgccagcggcgccgtggcc
cgcagtcgcgcgtttgcatacgatcagcgcgggcgcctgctgcaggtggcaggaaacaac
gggcagaaatccgcctacgcctacgataggacagggcacttgctttcggtatccgatgcc
atcaaccgcaccagtcaagcccagtatgatgcgttgcagcgcatgactcagtcaattgat
gcgaagggtaacgccactgcctatggctacgacaccaatgacaacctggccggtgtgacc
tcgcccagagggttagcgacgcaataccagcggaacggctttggacaagtaataaagttg
atcagccccgatactggccagacatcatatcaatacgatacggcaggcaaattgatcgtt
gccaccgacgcccgcggcaagaccgcccggatgcgctacgatgtgctgggcaggccaacg
caaatcagcttggcggaagatcagcaggtgtcgcttacttatgaccaaggcccatacggc
atcggccgattgaccgctgtcaacaatcccaccagcggcaattcctatcagtacgatgta
aatggccgcatcacgttccaaagacaaaccatcggtaacgtttccgaagaggtcaaatat
gaccatacggagatcggccaactgacctcaatgcactaccccagcggcacgacagtacag
tatacgtatgccgccgatggcaaggccgtgagtctaaacatcaacggcacgtcgttattg
agccagatcaaataccaggctgacgatcaaatcggacaatggacgtggggcaatacccga
gtggcgactcgctccttcgatgccgatggtcgccttaccgccttcagcaaggccggcagc
agtgccacgattgcgtatgacaacgccgaccgcatcatcaacatggccgacagcagcggc
ccgagccggagacaaggtttcgcttacgacaacaacgatgcgctgaccaactacacagcc
aatgccacgacccaaagctaccaatatgatgaggacggcaatcgcacggcgcaaggtaac
ggtggtgcaattgtcaattatgcgtatgccagcggcagtaaccgcttgttgaaactgacg
ggcagtcaaaaagctaccttgcaatacgatgcaaccggcaatatcgtagcagatggcact
aaccgctatacctacgatacacttggacgcctggtgcaggtaagcaatgcagcgggcagc
acgcgttacctgttcgatccgctgggtcaacgtgttgcgaaattaaacggcagcggcaag
gatggtgaagacgatgatagaaaaaaggaggccagcaacgaggacggcaagaccgccacg
acttacttcacctacgatacggccggccacctgattggagaatacaaccgtcagcgtagc
caatcgaccgaatacgtatggctgggcaatgcaccggttgctgtgctgaataaaaacgga
aacgctccggcccagctgtactatgtgcataccgatcatctgggcaccccacgacaagtc
acccatagcgcgaccaatgccgtagtttgggaatggtttggtgagccgttcggcaccagt
gtgccggatgaggatccaggtcacaccggcaagaaattcagcatgaacttgcgctacgca
ggtcagtactatgacaaggaatcgagtttattccacaacggattcagagattacaatccg
aaaatcgggcggtatgtgcaaagtgatccgattgggttggcgggggggattaatacttat
gggtatgtaggggggaatccgatcaacagggttgatccgacagggctgtattattttcaa
cagccatggcaagcaaatgatccaatcgtaggccgagaaaacacgtggatcgttcctggt
ggagcgataagctctttcattgaaaattatgtaccggcgggacgaacccttgctgaaata
catgacccgcttgtcggcgtgcttacgagcgcgggattgcctgatattattgccaatatt
ccaaccatgcctttagcgtatatagcggcatcctatctagaactccggcgatttctgggt
tttacagagcaacccaagcagatgtgcacgcgatga
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