Candidatus Nitrotoga arctica: NTG6680_0547
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Entry
NTG6680_0547 CDS
T08244
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc00300
Lysine biosynthesis
narc00470
D-Amino acid metabolism
narc01100
Metabolic pathways
narc01110
Biosynthesis of secondary metabolites
narc01120
Microbial metabolism in diverse environments
narc01230
Biosynthesis of amino acids
Module
narc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NTG6680_0547 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NTG6680_0547 (lysA)
Enzymes [BR:
narc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NTG6680_0547 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAG9931800
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Position
Ntg6680:complement(564649..565896)
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AA seq
415 aa
AA seq
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MTDYFQYQSNQLYAEQVPLADIAQRFDTPCYVYSHGALTDSYRQFAEAFKEREHLICYAV
KANPNIAILNLFAKLGAGFDIVSGGELQRVLAAGGAANKVVFSGVGKTVAEMQLALKAGI
LCFNVESEAELTRLNKVAGEMNEVAPVSLRVNPDVDAKTHPYISTGLKQNKFGIAYTEAL
ALYRKASGLPHLRVMGMDCHIGSQLTELSPFIAATEKMLVLVNALESEGIRLEHLDLGGG
LGICYLDETPPAIADYARALLSALRGRSEKIIIEPGRVLVGNAGVLLTKVEYLKHGEEKH
FAIVDAAMNDLMRPALYDAYHHIQPVQLGDMPVQQYEVVGPVCETGDFLGNARQLAISQG
DLVAVMSAGAYGMSMSSNYNTRPRAAEVMVAGEVMQLIRERETVQQLFAGEKLFC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattatttccaatatcagagtaaccagctttatgccgaacaagtacccttggct
gatatcgcacagcgatttgatacgccatgctatgtgtactcgcacggtgcgttaaccgat
agctatcgccagtttgctgaggcgttcaaagagcgcgagcatctgatctgctacgcggta
aaggctaatcccaatatcgctatcctgaatctattcgccaagttaggtgcgggctttgac
atcgtttccggtggcgaattacagcgtgtgctggcggctgggggtgcggcgaataaagtg
gtgttttccggtgtgggcaaaacagtggcagaaatgcagctggccttgaaagcgggcatt
ctgtgttttaacgtggaatcggaagcggaactcacgcgcctgaataaagtggccggagaa
atgaacgaggtggcaccggtaagcctgcgcgtgaatccagatgtggatgccaagacacat
ccctatatttccaccggcttgaaacaaaacaagtttggcatcgcctatacagaagcgctg
gcgttataccgcaaggcgagcgggctaccgcatctgcgtgtgatgggcatggattgccac
atcggttcacaattgaccgaactcagcccctttatcgcagcgacagaaaaaatgctggtg
ctggtaaacgcactggaaagtgaggggattcgtcttgagcatctcgatctgggcggtggg
ctcggtatctgttatctggacgaaaccccgcctgccattgccgattatgcccgtgcgcta
ctcagtgccctgcggggacgcagcgaaaaaatcattattgagccgggacgagtgctggtt
ggcaatgccggcgtgctgctgaccaaggttgaatatctcaaacatggcgaagaaaaacac
ttcgccatcgtcgatgcggcgatgaacgatctgatgcgtccagccttgtacgatgcctat
catcacatccagccagtacagctaggtgatatgccagtgcaacaatatgaagtggtggga
ccggtatgcgaaaccggcgacttccttgggaatgcccgtcaattggctatctcacagggt
gatctggttgcggtgatgtcggctggcgcctatggcatgagcatgagttcaaactacaac
acacgcccgcgtgcagccgaagtgatggtggctggtgaagtcatgcaacttatccgtgaa
cgcgaaacggtgcagcagttgtttgccggcgaaaaacttttttgttaa
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