Candidatus Nitrotoga arctica: NTG6680_1079
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Entry
NTG6680_1079 CDS
T08244
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
narc
Candidatus Nitrotoga arctica
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
narc03016
]
NTG6680_1079
Enzymes [BR:
narc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NTG6680_1079
Transfer RNA biogenesis [BR:
narc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NTG6680_1079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAG9932332
LinkDB
All DBs
Position
Ntg6680:complement(1130680..1132539)
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AA seq
619 aa
AA seq
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MNIFYEEDGAFKVGSILTDSITSLQVESTHGKRSKIKAANVLLRFAQPGLTEFMTQAEDI
AADIDVEFLWECSPPDDFGFNELASEYFGHTPHSIEAAGTLIRLHSSPMYFYKKGKGYYK
AAPPDALKSALASAEKKRLQAALQARYTNELIAFTLPPEFTDKLSYLLYKPDRNTLEVKA
LEAACTATHLSAAHLLQRCGAVPSTQAYHLQRFLFENFPHGTSFGEIDLAVWPDLPLAVD
TAFSIDDATTTEIDDALSVRELANGNWRIGVHIAAPSLGIAPGSPGDDIAMQRMSTVYMP
GDKITMLPDSVVQAFTLSADKVCPSLSMYLEVDADTLAVLSTESRIERIHIAANLRHDTL
EPLFNEETLAAGKQDFLFAAELTLLWNLAQKLEATRGKSADNSIQQVDYNFHVENDRVSI
STRQRGSPIDKVVAELMIFVNSEWGKLLATHDVAGIYRTQNNGKVKMSTVPAPHQGLGVA
QYMWSSSPLRRYIDFVNQRQIISLLREDPPAYTKNDTTLFAVMRDFDTAYTLYNEFQRNM
ERYWCLRWLLQENIQQAEALVLRENLVKFVHIPLVGRIPSLPELPPNTRVILEIGEIDLL
DLNFNARFISKIEEEATAC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttttacgaagaagacggcgctttcaaggtcggatcgatactcactgacagc
ataacctcgctgcaagtagaaagcacgcatggcaagcgcagcaagatcaaagccgccaac
gtgctgttacgttttgcccaacccgggctaactgaatttatgacgcaggcggaagacatc
gcagcagacatagatgtagaatttttgtgggaatgtagcccgccggatgatttcggcttt
aatgaactggccagtgaatattttggccacacgccccattcaatcgaggcagcgggcacc
ttgattcgcctgcattcctcgccaatgtatttttacaaaaaaggcaagggatattataag
gccgcaccaccggacgccctcaaatctgcgctagccagcgccgaaaaaaaacgcttgcaa
gccgccttgcaagcgcgttacaccaacgagctaatcgctttcaccctgccgccggaattc
accgacaaattatcgtatctactatacaaaccggatcgcaacacccttgaggtgaaagcg
ctggaggccgcctgcaccgctacgcacttgtcggccgcgcacttgttgcaacgctgcgga
gcagttccttccacgcaggcttatcatctgcagcgcttcttgtttgaaaatttcccgcat
ggaaccagtttcggtgagatcgatttagctgtctggcccgacctgccactagcagtggat
actgcattcagcatagatgatgcgactaccacagaaatcgacgatgccttgtcggttaga
gaacttgccaacggtaactggcgtatcggtgtgcacattgccgccccgtctttgggcata
gcgcctggttcaccaggtgatgatattgcgatgcagcgcatgtccacggtatacatgcct
ggagacaagatcaccatgttaccagacagcgtggtgcaggcatttaccctaagtgccgac
aaagtttgcccgtcgctttccatgtacctcgaagtggatgccgacaccttggccgtgctc
agcacggaaagccgcattgagcgcatccatatcgccgccaacctgcgccatgacacgctg
gaaccgctattcaatgaggagactctggctgccggcaagcaggattttctctttgcggca
gagctcacgctattatggaatttagcgcaaaagctggaagcaacacgtggcaaatccgcc
gacaatagtattcagcaggtggattacaattttcacgtggaaaacgatcgcgtcagtatc
agtactcggcagcgtggctcacccattgacaaggtggtagcagagctgatgattttcgta
aattctgaatggggaaaactgctcgcgacgcacgatgtagcgggcatctaccgcacgcaa
aacaacggcaaggtgaaaatgagtaccgtgccggcaccacaccaagggttgggcgtagcg
caatatatgtggtcaagctcgccgttgcgccgctacatagactttgtaaaccagcgccag
attatcagcctgttgcgcgaagacccacccgcctatactaaaaacgacacaacactgttc
gccgtgatgcgcgacttcgacactgcctatacgctttacaacgaattccaacgcaatatg
gaacgctattggtgcttacgctggctgctgcaggaaaacattcagcaagccgaagcgctg
gtactacgcgaaaatctggtgaaattcgtccacattccactggtgggccgcatcccatcc
ttaccggaattaccacctaacacgcgtgtaattctggagataggcgaaattgacctgctt
gacctgaatttcaatgcccgctttatctccaagattgaggaggaggccaccgcttgctag
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