KEGG   Candidatus Nitrotoga arctica: NTG6680_1190
Entry
NTG6680_1190      CDS       T08244                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
narc  Candidatus Nitrotoga arctica
Brite
KEGG Orthology (KO) [BR:narc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:narc03400]
    NTG6680_1190
Enzymes [BR:narc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NTG6680_1190
    5.6.2.6  RNA 3'-5' helicase
     NTG6680_1190
DNA repair and recombination proteins [BR:narc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NTG6680_1190
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII Cas3-like_C_2 PhoH AAA_25
Other DBs
NCBI-ProteinID: CAG9932443
LinkDB
Position
Ntg6680:1252070..1256503
AA seq 1477 aa
MHTSSSAANRKNFHPAVIAWFDATFSSPTEAQQQAWPLVRNSKTTLIAAPTGSGKTLTAF
LAAVDALVCESSEIGLPNETRVLYVSPLKALSNDIRINLLNPLEGIDRELKALGLPPHGI
RTAVRTGDTTQPERNAMRRCAPHILISTPESLYVLLGSDSGRAMLATVRTVIVDEIHAVA
GSKRGSHLALSLERLDALCARAPVRIGLSATQKPLSAVAEFLAGVGRECAIVDVGHVRER
DLGIELPPVPLEPIMSNQVWERVYDRLAELTVLHRTTLVFVNTRRMAERIARHLADRLGS
KHVAAHHGSLAKEYRQDAEQRLKRGELRVLIATSSLELGIDIGDVDLVCQMGSPRSIASF
LQRVGRSGHHVGGLPKGRLFPTSRDDLIECAALLDCARRDELDALRIPVAPLDVMAQQIV
AEVSNREWGEDELFDLIRRASPFATLERAQYNAVLRMLIEGYTGRQGVRGSYLHRDSVTS
TLRSRRGSKLTAVTSGGTIPDNADFTVILEPQGFNVGTVHEDFASESLAGDVFQLGNTSY
RIQRIEAGKVRVEDAHGAEPNLPFWLGEAPGRSDELSFGVSRLRGEIDRLLGEKDDGAEA
IEHAVDWLFEHLGLDDNAARQIAEYLATARAALTALPTRDTLVLERFFDESGGMQLVLHS
PYGSRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSDGHSFVLSEVWKYLRSSNAE
HVLTQALLEAPLFNVRWRWNVTTALVLPRYSGGRKVAPQIQRMRSDDLLAAVFPDQAACL
ENIVGERELPSHPLVDQTLQDCLHEAMDSEGWLVLLRRMEAGEVRLLSRDLTSPSPLAME
VLSARPYAFLDDAPLEERRTLAVSSRRWSDPTSPDDLGTLDAGAIEAVAGEAWPRAINSD
EMHEALMSLAFITPKEAMANEGWSEWLAELAASGRAAVFASADGSGPNAWIARERLSCLQ
VAYPNGRSAPPMTMPNDLSASDAEAWTSNTALVEILRARLSGFGPQSIADIAATLCMSEN
ATLIGLAQLENEGYVIRGSFTPGAVAEEWCERHLLARIHRYTIKRLRREIEPVERQDFMR
FLFEWQHLAEGAQLQGSDALPQILSQLEGYEAAAGSWESELLRLRMKDYSTTWLDELCRA
GKIVWTRVGAPSSSAGGPVRGTPLVLLPRRQLGLWHALPAVASEVEVSPRGVRVLDALRQ
NGAMFFDELSKDARQLPVELENTLGELVATGLVNADSFAGLRAMLLSAHKRAKSRKCGRR
GAAPTMEEAGRWALVRRADAVTITERVSEINADTQEGGIEKNDEVVAVGEALKRVARQPV
TRKPKTAPDTLEHIAMTLLRRYGVMFWHMLEREPSWLPSWRELLSVYHRLEARGEVRGGR
FVAGLSGEQFALPEAIPLLREMRRRSHDGSFVCISAVDPLNLCGTLLAGAKVPALAANRV
LFRDGVPVGTSIAGVFNYLPAHDPAERELIHSRLISP
NT seq 4434 nt   +upstreamnt  +downstreamnt
atgcatacatcctctagtgccgcgaaccggaaaaatttccatccagccgtaattgcttgg
tttgacgctactttctcaagtcctacggaggctcaacagcaggcatggccccttgttcgc
aatagcaaaacgacattgatcgcggcgccgactggctcgggcaaaaccctgaccgccttt
ctggcagctgtcgatgctctggtatgcgaaagtagcgaaatcggtctgcctaacgaaacg
cgcgtattgtacgtctcgcctcttaaggcgctgtcaaacgacattcgcatcaatttgctc
aatccgctggagggcatcgaccgagaattgaaggcactcggcctaccaccgcatggcatc
cgcactgctgtacggacaggggatacgactcagccggagcgtaacgcgatgcgtcggtgc
gctccgcatatcctgatttcgacaccagagtcgctatacgtgctgctcggctcagatagc
gggcgcgcgatgctggccaccgtgcggacagtaatcgttgatgaaatccatgccgtggct
ggcagcaagcgcggcagccatctggcgctcagcctcgaacgcttggatgcgttgtgcgca
cgagcccctgtccggattggtttgtcggccacccagaagccgttgtcagcagtggcagaa
ttcctggctggcgtgggacgcgaatgcgcgatcgtcgatgtcggccacgtgcgcgaacga
gacctcggcattgaattgcctccggttccgcttgagccgatcatgtccaaccaggtatgg
gagcgggtctatgacagattggcggagttgaccgtcctgcaccgcaccacgttggttttt
gtcaacacccgacgcatggccgaacgcattgcacgtcacctggccgatcggcttggttcg
aaacacgttgcagctcaccatggcagccttgccaaggaatatcggcaggacgctgagcag
cgtctcaagcggggagaattgcgggtattgatcgctacctcatcgctggaactggggatc
gatatcggcgatgtcgatctggtgtgccagatgggttcgccacgcagtattgcttcgttt
ttgcagcgcgtggggcggtctggacaccacgtcggtggtcttcccaaaggcaggttgttt
ccgacttcacgtgacgatctcattgaatgtgctgcactgctcgattgcgctcgtcgcgat
gaactggacgcgttacgcattcctgttgctccgcttgacgtgatggcacagcaaattgtc
gctgaagtgagcaatcgcgaatggggagaagacgagctgttcgacctgatccgccgggct
tcgcccttcgccacactggagcgcgcgcagtataacgcggttctgcgtatgttaattgaa
ggctataccggtcgccaaggggtacgtgggtcatatctgcatcgtgacagcgtcacgtcc
acgctgcgttcccggcgtggaagcaaactgacagcggtcacctctggcggcaccatcccc
gataatgctgacttcactgtcattcttgagcctcaggggttcaacgtggggacagtccac
gaggatttcgccagcgagagcctggcgggcgacgtttttcaacttggcaatacttcgtat
cgtatccagcgcatcgaggctggcaaggtacgtgtcgaggacgcgcacggcgctgagccc
aacctgccattctggttgggcgaggcccccggccgcagtgatgaactatcgtttggcgtc
tccaggttgcggggcgagatcgaccgtctcctcggggaaaaagatgatggcgcggaagca
attgaacatgccgtcgattggcttttcgagcacctcggcctcgatgacaacgccgcccgt
caaatagcggaatacctggccactgcgcgtgccgcgctgacggcgctgccgaccagagac
accttggtactggagcggtttttcgacgagtcgggtggtatgcagctggtgttgcattct
ccgtacggcagccgcatcaatcgcgcttggggtctggcactgcgcaaacgcttttgccgc
acttttaattttgaactgcaggcagccgcgactgaagacgccattgtgctgtccttgtcc
gatggacacagcttcgtattgagtgaagtgtggaaatatctgcgttcgagtaacgctgag
cacgtgctgactcaggccctgcttgaggcaccgctgttcaatgttcgatggcgttggaac
gtcaccaccgcgctggttcttccccgctacagcggtggtcgcaaggtggcaccgcaaata
cagcgcatgcgcagtgacgacttgctggccgccgtattccccgaccaggcagcgtgcctc
gaaaacattgtcggcgagcgcgaactgccgagccatcccctggtcgatcaaaccttgcaa
gactgcctgcacgaagcgatggacagcgaaggctggctggtgctgttgcggcgcatggaa
gcaggcgaggttcggctgctttcgcgcgatctcacttcgccgtcaccgttggcaatggaa
gtgctgagcgccagaccgtatgctttcctggatgacgcacctctggaagaacgccgtacc
cttgccgtcagttcccgccgctggagcgatccgacgtctcccgacgacctgggtaccctc
gatgccggcgccattgaagcggtggccggtgaagcctggccgcgtgcgatcaacagcgac
gagatgcacgaggcattgatgtcattggcatttatcacgccgaaggaagcaatggccaat
gaaggatggagtgaatggctggcggaactggccgctagcggtcgtgctgccgttttcgcc
agcgctgacggtagcggcccgaatgcctggatcgcgcgcgaacggttatcctgcctgcag
gtcgcctatccgaacggccgttccgcgccgccaatgacgatgccgaatgacctttccgcg
agtgacgccgaggcatggacgtcaaataccgcgctggtggaaattctgcgcgcgcgtctc
agcggttttggaccacaatcgattgccgacattgccgccacactctgcatgtcggaaaac
gccacactaatcgggttggcacagctcgaaaatgaagggtatgtcattcgcggcagcttt
acgcctggggcggtagccgaagaatggtgcgaacgacatttgttggcgcgcatacaccgc
tacaccatcaagcgcttgcggcgcgaaatcgagccggtcgaacggcaggatttcatgcgg
ttcttgtttgaatggcagcatttggcggagggcgcgcagcttcagggcagcgacgcgctg
ccgcaaattctgtcccaattggaaggctatgaggctgcagccgggagctgggagagcgag
ttgctgagactgcgaatgaaggactactcgaccacatggctcgatgagctgtgccgggcc
ggaaaaatcgtctggacgcgagtgggcgcaccttcgtcatctgcaggcggcccggtgcgc
ggcacaccgctggtactcctgccgcgccggcagctgggcttgtggcacgcgctgccggcg
gtcgcaagcgaggtggaggtttccccgcgcggtgtacgtgtactcgacgcattgcgccag
aacggtgcgatgtttttcgatgaattgtcgaaggacgcgcggcagctgccggtcgaactc
gaaaacacgttgggtgaactggtggccaccggtctggtcaatgcagacagcttcgccggc
ttgcgtgccatgttgttatcagcccataaacgcgccaagtctagaaagtgcggccgccgc
ggcgcggctccaacgatggaggaagcaggccgctgggcattggtacgccgcgcggacgcc
gtcacgatcaccgagcgtgtcagtgagatcaatgccgatacgcaggaaggtggcatcgag
aaaaacgatgaggtcgtggccgtcggcgaagcgcttaagcgtgtcgcgcggcagccggtg
acgcgcaagccgaaaaccgccccggatacattggaacatattgccatgacgcttctgcgt
cgttatggggtgatgttctggcacatgctggaacgggagccctcgtggctaccttcctgg
cgcgaattgctttctgtgtatcaccgactggaggctcgcggcgaggttcgtggtggtcgc
ttcgtggccggcctgtcaggagaacagttcgccctacctgaggcgattcctctgttgcgc
gaaatgcgccggcgttcgcacgacggcagctttgtctgcatctccgcagtcgatccgctc
aacctgtgcggtaccttgcttgcaggcgcaaaagtaccggcgctggctgccaacagggtg
ctgttccgcgacggagtgcccgtggggacatcgattgcaggcgtgttcaattatcttccc
gcgcacgaccctgctgagcgtgaattgatccattcgcgtctaatatccccttag

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