Candidatus Nitrotoga arctica: NTG6680_1246
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Entry
NTG6680_1246 CDS
T08244
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc00061
Fatty acid biosynthesis
narc00071
Fatty acid degradation
narc01100
Metabolic pathways
narc01212
Fatty acid metabolism
narc02024
Quorum sensing
narc04146
Peroxisome
Module
narc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NTG6680_1246
00071 Fatty acid degradation
NTG6680_1246
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NTG6680_1246
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTG6680_1246
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
narc01004
]
NTG6680_1246
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
narc04147
]
NTG6680_1246
Enzymes [BR:
narc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NTG6680_1246
Lipid biosynthesis proteins [BR:
narc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NTG6680_1246
Exosome [BR:
narc04147
]
Exosomal proteins
Exosomal proteins of breast milk
NTG6680_1246
Exosomal proteins of breast cancer cells
NTG6680_1246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAG9932499
LinkDB
All DBs
Position
Ntg6680:1313839..1315644
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AA seq
601 aa
AA seq
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MPDNQDHIITPEQAVTLHGLFVERVKRTPDAIAYRYFDTNENTWLSMTWAQARDQTARWQ
AALMREGLAVGDRVGIMLRNCPQWVLFDQAALSLGLVVVPLYTEDRQDSVAYIINDAGVK
VLLFENAEQWQELRSVCAQLPCIQRMISLDRVAGHNEARLLCAEEWLPAHAVLVEERGRE
RDALATIMYTSGTTGRPKGVMLSHRNILFDAHAALQTCPVAGMDTMLSFLPLSHAFERTV
GYYICVMAGVTVAYARSVQLLSEDLQIIRPTILVSVPRIFERVYGAISAKLEEASPLRRK
LFALAVNVGWRCFEHEQGRAGWHPSLLLWPLLNHLVASKVMARLGGRLRLTLCGGAALQP
EISRVFIALGLPILQGYGLTETSPIVCANRLNSNFPSSVGLPLPGVEVRIDEQGALLVKG
QNVMLGYWNNAEATRAMIDEDGWLNSGDIASISESGHITITGRLKEIIVMSNGEKISPAD
MEQAILRDRLFDLVMVHGEGHPYLTALAVVNPAGWAHLAQEVGVQADMPESLHDRRIEQQ
VLQRIADQIKEFPGYAKVHGVLLLTEPWSVDNGLMTPTLKVKRGSVVERFAKEIEQLYQG
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaaccaagaccacattatcacgcctgaacaggcagtcaccttgcatgggttg
tttgtcgagcgtgtgaaacgcacgcctgatgctattgcttatcgctatttcgatacgaat
gaaaatacttggctgtcgatgacatgggcgcaggcgcgcgatcaaacggcgcgctggcag
gcggcgctgatgcgtgagggattagcagtgggtgaccgagtcggcatcatgttgcgcaac
tgcccgcaatgggtattgtttgatcaggcggcgttatcgctcggccttgtggtggtgccg
ttatacactgaggacaggcaggatagcgtagcctatatcatcaacgatgcgggcgtgaag
gtactgttgttcgagaacgcagaacaatggcaagagttgcgtagcgtgtgcgcacagctt
ccctgcatacagcgcatgattagtctggacagggtagcagggcataatgaagcgcgtttg
ctatgtgcggaggagtggctgcccgcgcatgcggttttggttgaggaacgagggcgcgag
cgcgatgcgctggccacgatcatgtacacctcgggtaccacgggtcgccccaagggagta
atgctgtcgcatcgcaatattttgtttgacgcccatgcagccttgcagacctgtcccgtt
gccggaatggatactatgctgtcttttttgccgctttctcacgccttcgaacgtacggtg
ggttattacatctgtgtgatggctggcgtcacggttgcctatgcgcgttccgttcagttg
ttgtcggaggatttacaaatcattcgcccaactattttggtttctgtgcctcgcattttt
gagcgtgtgtacggggcgattagcgccaagctggaggaggcatcgccgttgcggcgcaag
ctattcgctttggcagtcaatgtaggttggcgctgctttgaacacgaacaggggcgtgct
ggctggcatccatccttattgctatggccgttgcttaatcacttggtagccagcaaggta
atggcgcgtttaggtggacgacttcgcctgactttgtgtgggggagcggctttgcagccg
gaaatctcacgcgtatttattgcactcggcttacctattttgcaaggctatggtttgacc
gaaaccagtcctatcgtttgcgctaatcgcttgaatagcaattttccgtccagtgttggg
cttcctttaccgggagtagaggtgcgcatcgacgaacagggtgcgttactggttaaaggg
cagaatgtgatgttaggttactggaataatgccgaggcgacacgcgccatgatagatgag
gatggctggctgaacagtggcgatattgcctccattagcgagtcagggcatatcaccatc
acggggcgtctgaaggaaattatcgtgatgtccaacggcgagaaaatttctccggcagac
atggaacaggccattctgcgtgaccgtttgttcgatctggtgatggtgcatggtgaaggg
cacccctatctgactgcgctggcagtagtgaatccggcaggctgggcacacttagcgcaa
gaggtcggggtgcaggcggacatgccggaatcgttgcatgaccgccgtatcgagcaacag
gtgttgcagcgtatcgctgatcagataaaggaattccccggttatgccaaggtacacggg
gtattactgttgaccgagccgtggagtgttgataacggcctgatgacgcccaccctgaag
gttaaacgtggatctgtggtggagcgctttgcaaaagaaattgaacagctttatcaagga
cactga
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