Candidatus Nitrotoga arctica: NTG6680_1674
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Entry
NTG6680_1674 CDS
T08244
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
narc
Candidatus Nitrotoga arctica
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
narc03032
]
NTG6680_1674 (hupA)
03036 Chromosome and associated proteins [BR:
narc03036
]
NTG6680_1674 (hupA)
03400 DNA repair and recombination proteins [BR:
narc03400
]
NTG6680_1674 (hupA)
DNA replication proteins [BR:
narc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NTG6680_1674 (hupA)
Chromosome and associated proteins [BR:
narc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NTG6680_1674 (hupA)
DNA repair and recombination proteins [BR:
narc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NTG6680_1674 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
PT-TG
YolD
ECM29_N
Urease_beta
Motif
Other DBs
NCBI-ProteinID:
CAG9932927
LinkDB
All DBs
Position
Ntg6680:1776685..1776978
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AA seq
97 aa
AA seq
DB search
MNKSELIDAVAKSTKQTKSSIEETLNALTAAIQTSLTKGNNVQLIGFGTFAVEARAARIG
RNPATGKELKISAKNVVKFKVGSKLKDAVAGAKTKKK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattgattgatgcagtagccaaatccactaagcagacaaagtctagt
atagaagaaaccttaaatgcactaacggcggcgattcaaacttctttaacaaaaggcaat
aacgtccaactaataggttttggtacttttgccgtagaagcacgcgctgcaagaatcggc
cgcaatccagccacaggcaaagaattaaagatatcagccaagaatgttgttaaattcaaa
gtcggtagtaagttgaaagatgcggtcgctggtgcaaaaaccaagaaaaaataa
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