Candidatus Nitrotoga arctica: NTG6680_1982
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Entry
NTG6680_1982 CDS
T08244
Symbol
fecI
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NTG6680_1982 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
narc03021
]
NTG6680_1982 (fecI)
Transcription machinery [BR:
narc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NTG6680_1982 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
HTH_20
HTH_10
HTH_11
HTH_40
HTH_IclR
HTH_Crp_2
HTH_28
HTH_5
Xre-like-HTH
TnsD
HTH_Tnp_ISL3
HTH_38
HTH_29
HTH_AsnC-type
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CAG9933231
UniProt:
A0ABN8AN86
LinkDB
All DBs
Position
Ntg6680:2080257..2080769
Genome browser
AA seq
170 aa
AA seq
DB search
MGTAELVLQQEVHALYSNHHGWLYGWLRKKLGCSHRAADLAHDTFVRLLAREEPVAIQEP
RAFLTTVAQRVLANHWRREQIERAYLDVLARVPEALVPSPEERTILLKTLVEIDCLLDGL
PALAKRAFLHAQLDDMTHAEIAAELGISISTVKRHLVRAGIQCYFALTAD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgctgagcttgtccttcagcaagaagtgcatgcgctctacagcaaccaccac
ggttggctgtatggctggctgcgcaagaaactgggctgctcgcatcgtgctgccgatctg
gcacatgatacttttgtgcggttgcttgcccgcgaagaaccggtggccatccaggaaccc
cgcgcctttcttacaactgtggcacagcgcgtgctggccaaccattggcggcgcgaacag
atcgaacgggcctacctcgatgtgctggcacgggtgccggaagccttggtaccatcgccg
gaagaacgaaccatcctgctcaaaacactcgtcgagatcgactgccttcttgacggcttg
ccagctttggccaagcgcgcgttcttgcatgcccagctcgacgacatgacgcatgctgaa
atcgcggccgaactcggcatctctatcagcaccgtcaagcgccatctggtgcgtgcgggc
atccaatgctatttcgcgttgacggcggactga
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