Candidatus Nitrotoga arctica: NTG6680_2491
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Entry
NTG6680_2491 CDS
T08244
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NTG6680_2491 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narc03019
]
NTG6680_2491 (orn)
03009 Ribosome biogenesis [BR:
narc03009
]
NTG6680_2491 (orn)
Messenger RNA biogenesis [BR:
narc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NTG6680_2491 (orn)
Ribosome biogenesis [BR:
narc03009
]
Eukaryotic type
Pre-60S particles
RNases
NTG6680_2491 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAG9933740
UniProt:
A0ABM8Z1L9
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All DBs
Position
Ntg6680:complement(2619838..2620434)
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AA seq
198 aa
AA seq
DB search
MAQYLFDSNLNKHTQSIMAQNQNYLIWIDMEMTGLVPETDRIIEVALVITDGDLNTIVEA
PVLVVHQADIVLDGMDSWNKATHGKSGLIDKVKASTLDDAVVEAQMLEFLKEHVPARTSP
MCGNSICQDRRFLARWMPQLESYFHYRNLDVSTLKELAKRWKPEVAQGIKKHGKHEALAD
IYESINEMKYYRDNFIRI
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatacctattcgacagtaatctcaataaacatacgcagtcaattatggcacaa
aatcaaaactacctcatttggatagatatggagatgaccggtctagttccggaaactgat
cgcattattgaagttgcgctggttattactgatggcgatctgaatactattgttgaagca
ccggttttggtagtgcaccaagcagatatcgtattggacggtatggatagctggaataaa
gccacccatggcaaatctggtcttatcgacaaggtgaaagcatctacgctggacgacgca
gtagtggaagctcagatgctggagttcctcaaggaacatgtgcccgcccgcacatcaccg
atgtgcggcaattctatctgccaagaccgtcgctttcttgcacgctggatgccgcaattg
gaaagctatttccactatcgtaacttggatgtaagtactcttaaggaacttgctaaacgt
tggaagccagaagtggctcagggaataaagaaacacggtaagcatgaagcgctggccgat
atttacgaatctatcaatgagatgaagtattaccgcgataattttatccggatataa
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