Candidatus Nitrotoga arctica: NTG6680_2680
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Entry
NTG6680_2680 CDS
T08244
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc03030
DNA replication
narc03430
Mismatch repair
narc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTG6680_2680 (dnaE)
03430 Mismatch repair
NTG6680_2680 (dnaE)
03440 Homologous recombination
NTG6680_2680 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
narc03032
]
NTG6680_2680 (dnaE)
03400 DNA repair and recombination proteins [BR:
narc03400
]
NTG6680_2680 (dnaE)
Enzymes [BR:
narc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NTG6680_2680 (dnaE)
DNA replication proteins [BR:
narc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NTG6680_2680 (dnaE)
DNA repair and recombination proteins [BR:
narc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NTG6680_2680 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAG9933929
UniProt:
A0ABM8Z1W9
LinkDB
All DBs
Position
Ntg6680:2820807..2824295
Genome browser
AA seq
1162 aa
AA seq
DB search
MSQPSFIHLRLHSEYSIADGIVRIPEAIAAAKQDVMPALALTDLNNVFGLIKFYQAARAA
GIKPIIGCDVFISNPAERDKPFRLLLLCQSNVGYLRLCELVTRAYLERQNSGRIEIHKQW
LRDGTEGLLALSGAHLGEVGTALLNGNQATARQLALEWAELFPSRYYLEVQRTGMVREEL
HVSETVKLAVELALPVVATQPIQFLSREAYKAHEARVCIAEGYVLNDKRRVRQFTPQQYF
KTQAEMMTLFADFPEALQNSVEIAKRCNLTLQLGKPYLPDFPTPNGESLDDFLRTESELG
LHQRMLQLYPDETVRAAKMEEYTSRLAFEIETIIKMGFSGYFLIVADFIRWAKLNDVPVG
PGRGSGAGSLVAYSLSITDLDPLRYALLFERFLNPERISMPDFDVDFCQDGRERVIEYVK
QKYGAASVSQIATFGTMASKAVIRDVGRVLDFPYGLCDRLSKLVPLEGVKPVSLKKAREL
EPEFNSIISSEEGVEELLELGTRLEDLTRNVGMHAGGVLIAPGKLTDFCPLYYAEGSDKG
ISQFDKDDVEKIGLVKFDFLGLRTLTIIDWAVKYVNKMPAGLGFPIENRFSIENLPLEDK
PTYALLKAANTTAIFQLESPGMKKLIIKLQPDTFEDIVALVALYRPGPLESGMVEDFINR
KHGRSKADYFHPELEISLKPTYGVIVYQEQVMQIAQIIGGYSLGAADLLRRAMGKKNAEE
MALQRSIFVDGAVARAINKRLAEQLFDLMEKFAGYGFNKSHSAAYALVSYQTAYLKAHYP
AAFMAATLSSDMDNTDKVHIFYLDTLAQGISILPPDINSSVNRFMPVDEKTIAYGLEAIK
GTGKAAIDSIEHARKLGGPFRDLFDFCHRVDKRVVNRRATEALIRSGAFDKISDHRYQLL
ASLEIALCSAEQKAQSVNQNSLFEYDASVTMSVQMKNVPRWTVREQLQHEKTSLGFYLSG
HPYQEYANELENFVKTRLADITLQALPQNGNTKRGGVPVVLAGIVSAMRIQQTRRGRMAI
VTLDDGSAQLEMMVFNEVFEANRPWIREDELLVVRGKASLDEYSGNMRVNGEELFDFASA
RSTFAKRLELTVASDARISVTQLKELLEPYREGKCMTVVCYRNTSGSANLKLGEAWSVTL
HSDLMSGLKKLLGEQNVHIAYT
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccctctttcatccatctgcgtctgcacagcgaatactccattgctgatggc
attgtgcgcattcccgaggcaattgccgccgccaagcaggatgtcatgcccgccctggca
cttaccgacctcaataatgtgttcggcttgatcaaattctatcaggcagcgcgcgctgcc
ggcatcaagcccatcatcggctgtgatgtattcatcagcaatccagccgagcgcgacaag
ccgttccggctgctgttgttatgccagtccaatgttggctatctgcgattgtgtgaattg
gtgacacgcgcctatctggaaaggcaaaacagtggtcgcatcgagatacacaaacaatgg
ctgcgcgacgggacagagggactgctcgcattatccggcgcacatctcggtgaggtcggc
acggcgctgctgaatggcaatcaggcaacggctcgtcagctggcgcttgagtgggcggag
ctgttccccagtcgatattatctggaagtgcagcgaaccggcatggtgcgcgaagagctg
cacgtgagtgaaacggtcaaactggccgtagagctggcgttaccggtagtagctacacaa
ccaatccagttcctaagccgtgaagcttacaaagcgcacgaggcgcgcgtctgcatcgcc
gaagggtatgtgctgaatgacaagcggcgcgtgcgccaatttaccccgcagcagtatttc
aaaacccaggccgagatgatgacgctgttcgccgattttcctgaagcgttgcaaaacagt
gtggagatcgccaagcgatgtaatttgaccttgcaactaggtaagccatatttgccggat
ttccccaccccaaatggcgaaagcctggatgattttctgcgtacggaatccgaactcggt
ttgcatcagcgcatgctgcagttgtatccggatgaaactgtgcgcgccgcgaagatggag
gaatatacctcacgcttggcattcgaaattgaaaccattataaaaatggggttctccggt
tactttttgattgtggccgatttcatccgctgggccaagctcaatgacgtgccggtcggc
cccggccgcggctcaggcgcaggttcactggtggcttacagtctcagtatcaccgatctt
gacccgctacgctacgccctgctctttgaacgctttctgaatccggaacgcatatccatg
cccgacttcgatgtggatttctgccaggatgggcgcgagcgcgttatcgagtatgtgaaa
caaaaatacggcgcggcgagtgtgtcgcagattgccaccttcggcaccatggcgtccaaa
gcggtgatccgcgatgtcggacgcgtgctggattttccttacggcctgtgtgatcgcctg
tccaagctcgttccgctggaaggcgtcaaaccggtatcactgaaaaaagcacgtgaactg
gagccagaatttaacagtattatcagcagcgaagaaggtgtggaagagctgcttgaactg
ggtacacggctggaagatttaacgcgcaatgtcggcatgcatgcgggcggggtactgatc
gcaccgggcaagctgaccgatttttgtccgctatattacgccgagggcagcgacaagggc
atcagtcaatttgataaagacgatgtggaaaagatcggcttggtgaaattcgactttttg
gggttgcgcacgctcaccatcattgattgggcggtgaaatatgtaaacaaaatgcccgca
ggcctaggttttcccattgaaaatcgcttctccatcgaaaaccttccactggaggacaaa
ccaacttacgccctgcttaaggctgctaacactacagcgatatttcagcttgaatctcct
ggcatgaaaaagctgattatcaagttgcaaccggacacatttgaagacatcgtggcgctg
gttgcattatatcgcccaggtccgctcgaatcaggcatggtagaggacttcattaaccgc
aaacatggccgttccaaggctgattattttcatcccgaactggaaatttcgctcaagcca
acttacggtgtgatcgtgtaccaagagcaagtgatgcagatcgcgcagatcatcggcggt
tattcgctgggagcggcggacttgttgcgccgcgcgatggggaaaaaaaatgctgaggag
atggcgctgcaacgcagcatcttcgtggacggcgctgtggcgcgcgctatcaacaagcga
ctagctgagcaactgttcgacctgatggaaaaattcgctgggtacggttttaacaaatcg
cattctgctgcctatgcgttggtgtcatatcagaccgcctatctaaaggcgcattacccg
gcggcattcatggccgccacactatcatctgatatggataacaccgacaaagtccatatt
ttctatctcgataccctggcgcaaggaataagtattttgccgccggatattaactcgtct
gtaaaccgctttatgccagtggacgaaaaaacgattgcatatggattggaagccattaaa
ggtacaggtaaagctgcgatagatagcattgaacatgctcgtaaactcggtgggccattc
cgcgacctgttcgatttttgtcatcgcgtagataagcgcgtggtgaaccgtcgcgccact
gaagcgctgatccgcagtggcgcattcgataagatttcggatcatcgctatcagttgctg
gcgtcgctcgagatcgcgctttgcagcgcggaacagaaagcacaatcagtcaatcaaaat
agtctattcgaatacgatgcaagtgtgacgatgtcggtgcaaatgaagaacgtcccgcgc
tggacggtgcgcgagcaattgcaacatgaaaaaaccagcttgggtttttatctcagcggc
catccctatcaagaatatgccaacgaactagaaaatttcgtcaagacacgcctggccgat
atcacgctgcaagcgctaccgcaaaacggcaacaccaaacgcggtggagtgccggtagta
ttggctggcatagtgtctgccatgcgaatacagcagacgcggcgtgggcgcatggcaatt
gtcacactggacgatggcagcgcacagttggaaatgatggtattcaacgaagttttcgag
gccaatcgcccgtggatacgtgaagatgaattgctggtggtgcgcggcaaagccagtctc
gacgagtattccggcaatatgcgcgtcaatggtgaggagttattcgatttcgcctcggcg
cgttccactttcgcgaagcgcctggaacttactgttgcgtctgacgcacgcattagcgtg
actcagttaaaagaactactcgagccctaccgagaaggcaaatgcatgactgtagtgtgc
taccgcaatacgagcgggagcgcaaacctgaagctgggcgaggcttggagtgtcacgctg
cacagtgatctaatgagcggattaaagaaactgctaggcgagcagaatgttcatattgct
tatacttga
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