Candidatus Nitrotoga arctica: NTG6680_2708
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Entry
NTG6680_2708 CDS
T08244
Symbol
fecI
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NTG6680_2708 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
narc03021
]
NTG6680_2708 (fecI)
Transcription machinery [BR:
narc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NTG6680_2708 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_11
HTH_40
HTH_29
HTH_24
GerE
HTH_20
HTH_IclR
HTH_31
HTH_28
HTH_17
DUF2481
MarR
HTH_Tnp_4
HTH_7
Motif
Other DBs
NCBI-ProteinID:
CAG9933957
UniProt:
A0ABM8Z299
LinkDB
All DBs
Position
Ntg6680:complement(2855735..2856244)
Genome browser
AA seq
169 aa
AA seq
DB search
MSADDIATQQIHILYTDHHGWLYGWLRRKLGNACHAADLAQDTFMRVLTRQQPLYLDEPR
AYLSAIARGLVVDHWRRRELELAWLEILAVLPEAEEPSPETRLIFLETLIEIDRLLDSLK
PQVRTAFLLAQLDGLTCPQIAEHLSVSLSTVERYIAKALRDCYALRFEP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcggatgatattgcaacgcagcagatccacatactgtacaccgatcatcacggt
tggctgtatggttggctgcgtcgcaagctcggcaacgcctgccacgccgcggacctcgcg
caggataccttcatgcgcgtgctcacccgacagcagcccctgtacctggacgagccgcgt
gcctatctttccgccatcgcgcgcggtctggtcgtggatcactggcggcggcgcgagctg
gagctggcctggctggaaattttggccgttctgcctgaggccgaggagccttcgcccgaa
acgcgcctgatctttctggaaacgctgatcgagatcgatcggttgctcgactcgctcaag
cctcaggtacgtactgcttttctgctggctcaactcgacgggctcacttgcccgcagatc
gctgagcacctgagcgtgtcgctgtccactgtggaacgctacattgccaaggctctgcgc
gattgttacgctctgcggtttgagccatga
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integrated database retrieval system
