Candidatus Nitrotoga arctica: NTG6680_2782
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Entry
NTG6680_2782 CDS
T08244
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase 1
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
narc
Candidatus Nitrotoga arctica
Pathway
narc00521
Streptomycin biosynthesis
narc00523
Polyketide sugar unit biosynthesis
narc00525
Acarbose and validamycin biosynthesis
narc00541
Biosynthesis of various nucleotide sugars
narc01100
Metabolic pathways
narc01110
Biosynthesis of secondary metabolites
narc01250
Biosynthesis of nucleotide sugars
Module
narc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NTG6680_2782 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NTG6680_2782 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NTG6680_2782 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NTG6680_2782 (rfbB)
00525 Acarbose and validamycin biosynthesis
NTG6680_2782 (rfbB)
Enzymes [BR:
narc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NTG6680_2782 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
CAG9934031
UniProt:
A0ABN8ATZ7
LinkDB
All DBs
Position
Ntg6680:2929204..2930271
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AA seq
355 aa
AA seq
DB search
MNKILITGGAGFIGSAVIRQLITETDTTVINVDKLTYAGNLQSLISVAENPRYHFEHVDI
CDAATVAGLFHEHQPDAVMHLAAESHVDRSITGPAAFIETNIIGTYTLLKAAREYWSELA
AERKNNFRFHHISTDEVYGSLGETGFFTENTAYQPNSPYSASKASSDHLVRAWYHTYGLP
VVTTNCSNNYGPYHFPEKLIPLIILNACNGKPLPIYGKGDNIRDWLYVDDHARALRLVLE
RGRVGDTYNIGGWNEKTNLEVVYAICAILDELRPQGAPHTSLITYVQDRPGHDQRYAINA
GKIAQELGWKPLETFETGLRKTVEWYLTNPDWVDAVISGEYQNWIQQNYGDRETS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatccttattaccggcggtgccgggtttattggctctgcggttattcgccaa
ctgatcacggaaaccgacactacagtcatcaatgtcgataagctgacctatgccggcaat
ttacagtccttgatatcagttgcagaaaatccccgctaccacttcgaacatgtggatatt
tgtgatgctgctacagtcgcaggcctatttcatgaacatcagccggatgcggtaatgcat
ttggctgcggaatcccatgtcgatcgatctatcaccggcccggcagcctttattgaaacc
aatattattggcacgtacactctcctgaaagcagcgcgggaatactggagcgagcttgct
gcagaacgcaaaaacaattttcgcttccaccatatatccacagatgaggtatatggcagt
ctcggtgaaaccggtttttttaccgagaataccgcttaccagccaaactcaccttactcg
gcaagcaaagcgtcttcagaccatctggtgcgtgcttggtatcatacttacggcttgccc
gtggtcaccaccaactgctccaataattacggcccttatcatttcccggagaaactcata
ccgttgatcatcctgaatgcatgcaatgggaaaccgctacccatttatggcaagggcgac
aacatccgcgactggttgtatgtggacgaccatgcgcgtgccttgcgcctagtactagag
cggggccgggtgggagacacttacaatatcggcggctggaatgaaaaaaccaatctggaa
gtagtttatgcgatttgcgctattcttgatgagctccgtcctcaaggtgcgccgcatact
tcccttatcacctacgtacaagacagacccggacatgaccagcgctacgcgatcaatgcc
ggtaaaatcgcccaggaactgggctggaaacctttggaaacatttgaaaccggattgcgc
aaaacagtggaatggtatctgacaaacccagattgggttgatgctgtcattagtggagaa
taccaaaattggattcaacaaaattacggcgatagggaaacatcatga
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