Candidatus Nitrotoga arctica: NTG6680_3120
Help
Entry
NTG6680_3120 CDS
T08244
Symbol
rlmI
Name
(GenBank) Ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
narc
Candidatus Nitrotoga arctica
Brite
KEGG Orthology (KO) [BR:
narc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
narc03009
]
NTG6680_3120 (rlmI)
Enzymes [BR:
narc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
NTG6680_3120 (rlmI)
Ribosome biogenesis [BR:
narc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NTG6680_3120 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
Methyltransf_15
Methyltransf_25
MTS
PrmA
PUA
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRM
Methyltransf_11
FtsJ
Methyltransf_12
UPF0020
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
CAG9934369
LinkDB
All DBs
Position
Ntg6680:complement(3246662..3247849)
Genome browser
AA seq
395 aa
AA seq
DB search
MNKIILKEGREKSLLRRHPWIFSGAIKRVEGSPADGDTVQIYSTQGAFLAHAAYNAHSQI
AARAWSWHAEQSINADFFRTKITHALTLRKDLKLAQHSTGLRLIHGESDGLPGLVVDQYG
DVLVIQIGSAGAERWRDTCADILQEMCNPVCIYERSDSDSRALEGLPERNNVLYGNLPES
LTIVEHSLHFAVDVAHGQKTGFYLDQRDNRELIGTLAQDKDVLNCFCYSGGFSLYALRGG
AKSVLSIDSSNEALQLAQRNVERNGLDASRAEWQCDDVFQALRKLRDQNRKFDLIILDPP
KFAPTAAFAEKAARGYKDINLLGFKLLRPGGMLATYSCSSGINDDLFQKIIAGAALDAGV
TAHIIRKLHAAPDHPILLEFPEGAYLKGLVLRVAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattattcttaaggaggggagggagaaatcccttctgcgccgtcacccctgg
atattttccggggcaattaaacgtgtggaaggttcacctgctgatggtgacacggtacag
atatactcaacacaaggcgcttttctcgcccatgccgcatacaatgcacattcacaaatt
gctgcgcgagcatggtcatggcacgcggagcaaagcattaacgcagattttttccgcacg
aaaatcacccatgcactgacattgcgcaaagatctcaaattggcgcaacacagcactggc
ctgcgcctgattcatggcgaatccgatggtctgcccgggttggtagtagatcaatatggc
gatgtattggttatacaaattggcagtgcgggagcggaacgctggcgcgacacttgtgcc
gacatattgcaagagatgtgcaatccagtttgcatttatgagcgttctgattctgattca
cgtgcattagaaggcttgccggaacgcaataacgttctatatggcaacttgcccgaatct
ttaaccattgtggaacacagcctgcactttgccgtggatgtagcacacgggcagaagacg
ggcttttatctcgaccagcgcgacaaccgcgaactgattggaacactggcgcaagacaag
gatgttctgaattgtttttgctacagcggcggtttctcgctgtatgcactgcgcggcggc
gcgaaatcagtgctatcaattgattcttcgaatgaagcactgcaactggcacagcgcaat
gtggaacgtaatggactcgatgccagtcgcgctgaatggcaatgcgacgacgtgttccag
gcactgcgcaaactgcgtgaccagaaccgaaaatttgacctgattatccttgatccaccc
aaattcgcgcccaccgccgccttcgccgaaaaagccgcgcgcggctacaaggatattaac
ctgttaggcttcaagctgcttagaccgggaggaatgctcgccacctattcatgttccagc
ggcataaacgatgacctgtttcagaaaattattgccggtgccgccttggatgccggagtg
actgcgcatatcatacgcaaactgcacgccgcgccggatcacccgatattattggaattt
ccggaaggcgcatatctcaagggacttgtattgcgcgtggcaggttaa
DBGET
integrated database retrieval system
