KEGG   Neopusillimonas aromaticivorans: N7E01_17135
Entry
N7E01_17135       CDS       T09541                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
narm  Neopusillimonas aromaticivorans
Brite
KEGG Orthology (KO) [BR:narm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:narm03016]
    N7E01_17135 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:narm02048]
    N7E01_17135 (vapC)
Transfer RNA biogenesis [BR:narm03016]
 Prokaryotic type
  tRNA degradation factors
   N7E01_17135 (vapC)
Prokaryotic defense system [BR:narm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    N7E01_17135 (vapC)
SSDB
Motif
Pfam: PIN PIN_3 HTH_59 DUF5615
Other DBs
NCBI-ProteinID: WJJ93590
LinkDB
Position
3083147..3083557
AA seq 136 aa
MLKFMLDTNICIFTIKNRPQEVREAFKRHSGQMCISTVTLMELIYGAEKSSNPERNLADV
EAFAARLDVLNYDAQAAAHTGQLRAELARVGQQIGPYDQMIAGHARSNGLIVVTNNRREF
DRVPGLRIEDWVAQAG
NT seq 411 nt   +upstreamnt  +downstreamnt
atgctcaaattcatgctcgacaccaatatctgcattttcaccatcaagaatcggccgcaa
gaagttcgggaagcgttcaagcggcactctggccaaatgtgcatcagcacggtaacgctg
atggaactcatctatggtgccgagaaatcttcgaatcccgagcgtaatctggcagacgtt
gaagctttcgctgcgcgccttgacgtactcaactatgatgcgcaagcggccgcacatacc
ggtcagcttcgcgcagagcttgcccgtgttggccagcagattggtccctatgaccaaatg
atcgcaggccatgcccgatcgaacgggcttattgtggtgactaacaaccgccgcgagttc
gaccgggtacccggtttaagaattgaagattgggttgcccaggcgggatga

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