Nocardioides aromaticivorans: CFH99_00155
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Entry
CFH99_00155 CDS
T07236
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
naro
Nocardioides aromaticivorans
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naro03400
]
CFH99_00155
DNA repair and recombination proteins [BR:
naro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CFH99_00155
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QSR24038
LinkDB
All DBs
Position
38462..38890
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AA seq
142 aa
AA seq
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MNESWASSPGVRRGMQGNRGRDTKPEMAVRRGVHAAGLRFRVDYRPIRELNRRADLVFTR
AKVAVFVDGCFWHGCPTHHKVAKSNAAFWAQKVARNRERDAETDRILSDAGWTVIRVWEH
DPVDDVVNLIVASVRRDDCELS
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtcatgggcgtcctctccgggtgtccggcgcggcatgcaggggaaccgggga
cgagacaccaagccggaaatggcggtcaggcgcggtgtgcacgcggcgggactgcgtttc
cgcgtcgattaccggccgatccgcgaactcaatcggagggctgacctggtgttcacacgt
gcgaaagtggctgtcttcgttgacggatgtttctggcacgggtgccccacccatcacaag
gtcgcgaagtcgaatgctgcgttctgggcccagaaggtggcacggaaccgggagcgggac
gccgagacggatcgaattctaagcgacgcgggttggaccgtcatacgagtttgggagcac
gaccctgtcgatgatgtcgtaaacctcatcgtcgcctctgttcgtcgggatgactgcgag
ctgtcgtaa
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