Nocardioides aromaticivorans: CFH99_01180
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Entry
CFH99_01180 CDS
T07236
Name
(GenBank) hypothetical protein
Organism
naro
Nocardioides aromaticivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
DUF11
SpaA_3
HYDIN_VesB_CFA65-like_Ig
SpaA_4
Motif
Other DBs
NCBI-ProteinID:
QSR24236
LinkDB
All DBs
Position
247813..253263
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AA seq
1816 aa
AA seq
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MWQASQRFPDQRVRKRPTQLSPPRVRHRPAPVSEYGELFQMSKHAARRRRSHASRRLRRP
ALVSGAVALALLLVAAALPGAPRSAAPVTDALLLAAAGVPEAGTPIFTETFSEQNASTTG
INILNYSGTNGMTYDADPAYTPAGAQCNGWVMNSLTPQPTAAQDAGCANNQPDGWNQLRQ
MAISLGLAQGQTAAQAADNQVLTEYTNATNGSIPAGYELKSEGSIPAIAGHYYAVSAYFA
EVNCFAAHAKMTFSLVINGTPTVLSTGLDPCTAPGGTVPIPNGARVVKLQSAAMQLPATG
AQSLGLQLYNATTSGSGNDVSFDLPQIVDVTPSLDKSFSPPLIAPGGVSTLTFTVTNTTE
LMAKNDWSFTDNLPAGLKVAATPNVGGTCTSTTGAPLVRTATAGATSIAVTGGDLALNQE
SCTVTVDVTSDIEGTYVNGPANVTTNLLPPEDTPLEVLAPRIRLVKALDAPRITDADQFT
VQIHRGSATGAVVNSTAASTTTGTGTTVTTGTGTTGTYVADVDTTYFLTETASSGTDLGA
YDKTITCVDANGRQTGLPSGATFSGSLSIKPVAGADVTCTLTNTADPQPAIELLKRVASV
DDVNGNGLTDLGDEINYVFDLENTGNVTLTDVAVDDPLLAGLGITVTCDPTTLAPGASVT
CTADEPYVITQADVDAGTVENVATATGTPPSGPVVETPESPTVTPLDGEPAIELVKTADK
TDLVVGETMTYTFVATNTGTVTLSDVVVEESAFSGSGTVSAIDCDPTAPAVLAPGESMEC
TATYVVTQADVDAGQVDNAATTTGTPPSGPKVTDEDDVTVPGTSEPAIELVKTADKTDLV
VGETMTYTFVTTNTGNVTLSDVVIAESAFTGSGTVSAIDCDPTAPSVLAPGESMECTATY
VVTQADVDAGQVDNAATTTGTPPSGPKVTDEDDVTVPGTSEPAIELVKTADKTDLVVGET
MTYTFVTTNTGNVTLSDVVIAESAFTGSGTVSAIDCDPTAPAVLAPGESMECTATYVVTQ
ADVDAGQVDNAATTTGTPPSGPKVTDEDDVTVPGTSEPAIELVKTADKTDLVVGETMTYT
FVTTNTGNVTLSDVVIAESAFTGSGTVSAIDCDPTAPAVLAPGESMECTATYVVTQADVD
AGQVDNAATTTGTPPSGPKVTDEDDVTVPGTSEPAIELVKTADKTDLVVGETMTYTFVTT
NTGTVTLSDVVVEESAFSGSGTVSAIDCDPTAPSVLAPGESMECTATYVVTQADVDAGQV
DNAATTTGTPPSGPKVTDEDDVTVPGTQAPELELLKRVASVDDVNGNGLTDLGDEINYVF
DLENTGNVTLTDVAVDDPLLAGLGITVTCDPTTLAPGASVTCTADEPYVITQADVDAGTV
ENVATATGTPPSGPVVETPESPTVTPLDGEPAIELVKTADKTDLVVGETMTYTFVTTNTG
NVTLSDVVIAESAFTGSGTVSAIDCDPTAPAVLAPGESMECTATYVVTQADVDAGQVDNA
ATTTGTPPSGPKVTDEDDVTVPGTSEPELSLNKRVSSVSDVNDNGLTDLGDEIEFVFDLE
NTGNVTLTDVAVDDPLLAGLGITVTCDPTTLAPGASVTCTADEPYVITQADMDAGTVENT
ATSHGTPPTGPPVPSNPDETVTELDDEPALVLDKRVTSVTDVDGDGRTDEGDEIAYAFDL
TNTGNVTLTELVVDDPMLEAAGIAVTCPVTSLAPSETVTCLADEAYVITAADVDAGAVRN
TATAGYTPPGQPPVVTPPDSVTTPIELPEPDVSSGSAGSGGGLPNTGGPSLLLIGGAGIS
LLAGLVLVGRNRRKVA
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggcgtcacagagattcccggatcagcgcgtaagaaagcgcccgactcaactg
tctcccccccgagtgcgccacaggccggcgccggtttccgagtatggggagttgtttcag
atgtccaaacacgctgcacggcgacggcgctcgcacgcgagccggcgtctgcgacgtcct
gcccttgtctccggcgcggtcgccttggcgctactgctggtggccgctgcgctgccgggc
gctccccggagcgcggcgcccgtgacggacgcgctcctgctggcggcggccggtgttccc
gaggcaggcacgccgatcttcaccgagacgttctccgagcagaacgcctcgacgacgggc
atcaacatcctcaactactcgggcaccaacggcatgacgtatgacgccgacccggcgtac
acgcccgcaggggcgcagtgcaacggctgggtgatgaactcgctcaccccgcagccgacg
gctgcgcaggacgcagggtgtgccaacaaccagcctgacgggtggaaccagctccgccag
atggcgatcagtctcggcctcgcccaaggacagaccgctgcccaggcggccgacaaccag
gtcctcaccgagtacacgaatgcgaccaacgggtcgatcccggccggctacgagttgaag
tccgagggttcgatccctgccatcgcgggtcactactacgcggtgtcggcctacttcgcc
gaggtcaactgcttcgcggctcacgccaagatgacgttctcgctggtcatcaacggcacc
ccgacggtgctgagcacgggcctcgacccgtgcaccgcacccggcggcacggtccccatc
cccaacggtgcgcgcgtggtgaagctgcagtcggccgcgatgcagctgcccgccacggga
gcgcagtcgctcggcctccagctgtacaacgcgacgacgagcggctccggcaacgacgtc
tcgttcgacctcccccagatcgtggacgtgacccccagcctcgacaagtccttcagcccg
ccgctgatcgccccgggcggcgtctcgacgctcaccttcaccgtcaccaacacgacggag
ctgatggcgaagaacgactggtccttcaccgacaacctgccggccgggctcaaggtcgcg
gcgacgccgaacgtcggcggcacctgcacctcgaccaccggcgccccgctggtgcggact
gcgactgccggcgcgacgtcgatcgcggtgacgggtggcgacctcgccctgaaccaggag
tcctgcacggtcaccgtcgacgtcacgtccgacatcgaaggcacctacgtcaacggcccg
gcgaacgtgacgaccaacctgctgccgccggaggacaccccgctggaggttctcgcgccg
cggatcaggctggtgaaggccctggacgcgccgcggatcacggatgccgaccagttcacg
gtccagatccaccgcggctctgccaccggagccgtcgtgaacagcaccgccgcgtccacc
acgaccggcacggggaccaccgtgaccacgggcacgggcacgaccggcacctacgtggcc
gacgtcgacacgacgtacttcctgaccgagaccgcgtcctcagggaccgatctcggcgcc
tacgacaagacgatcacctgtgtcgacgccaacgggcgccagacgggtctgccgagcggg
gcgacgttctcgggttcgctgagcatcaagccggtcgccggtgccgacgtcacctgcacc
ctgaccaacaccgccgacccgcagccggcgatcgagctgctcaagcgggtggcgtcggtc
gacgacgtgaacggcaacggtctgacggacctgggcgatgagatcaactacgtgttcgac
ctcgagaacaccgggaacgtgacgttgaccgacgtggcggtcgatgacccgctgttggcg
ggtctggggatcacggtcacgtgtgacccgacgacgctggcgccgggtgcgtcggtgacg
tgcacggctgatgagccgtacgtgatcacgcaggccgatgtggatgccggcacggtcgag
aacgtcgcgaccgcgacgggcacgcccccgtcgggtccggtggtcgagaccccggagagc
cccacggtcacgccgttggacggcgagccggcgatcgagctggtgaagacggctgacaag
accgatctggtggtgggggagacgatgacgtacacgttcgtcgcgaccaacaccgggacg
gtgacgctgtccgatgtcgtggtcgaggagtctgcgttctcgggttcggggacggtgtcg
gcgatcgactgtgacccgaccgcgccggcggttcttgcgccgggtgagtcgatggagtgc
actgcgacgtatgtggtgacgcaggccgatgtggatgccggtcaggtggacaacgctgcg
acgaccacgggtacgccgccgtcgggtccgaaggtcaccgatgaggacgacgtgacggtc
ccgggcacctcggagccggcgatcgagctggtgaagacggctgacaagaccgatctggtg
gtgggggagacgatgacgtacacgttcgtcaccacgaacaccggaaacgtcaccctgagc
gatgtcgtcatcgccgagtctgcgttcacgggttcggggacggtgtcggcgatcgactgt
gacccgaccgcgccgagcgtgttggcgccgggtgagtcgatggagtgcactgcgacgtat
gtggtgacgcaggccgatgtggatgccggtcaggtggacaacgctgcgacgaccacgggt
acgccgccgtcgggtccgaaggtcaccgatgaggacgacgtgacggtcccgggcacctcg
gagccggcgatcgagctggtgaagacggctgacaagaccgatctggtggtgggggagacg
atgacgtacacgttcgtcaccacgaacaccggaaacgtcaccctgagcgatgtcgtcatc
gccgagtctgcgttcacgggttcggggacggtgtcggcgatcgactgtgacccgaccgcg
ccggcggttcttgcgccgggtgagtcgatggagtgcactgcgacgtatgtggtgacgcag
gccgatgtggatgccggtcaggtggacaacgcagcgacgaccacgggtacgccgccgtcg
ggtccgaaggtcaccgatgaggacgacgtgacggtcccgggcacctcggagccggcgatc
gagctggtgaagacggctgacaagaccgatctggtggtgggggagacgatgacgtacacg
ttcgtcaccacgaacaccggaaacgtcaccctgagcgatgtcgtcatcgccgagtctgcg
ttcacgggttcggggacggtgtcggcgatcgactgtgacccgaccgcgccggcggttctt
gcgccgggtgagtcgatggagtgcactgcgacgtatgtggtgacgcaggccgatgtggat
gccggtcaggtggacaacgcagcgacgaccacgggtacgccgccgtcgggtccgaaggtc
accgatgaggacgacgtgacggtcccgggcacctcggagccggcgatcgagctggtgaag
acggctgacaagaccgatctggtggtgggggagacgatgacgtacacgttcgtcaccacg
aacaccgggacggtgacgctgtccgatgtcgtggtcgaggagtctgcgttctcgggttcg
gggacggtgtcggcgatcgactgtgacccgaccgcgccgagcgtgttggcgccgggtgag
tcgatggagtgcactgcgacgtatgtggtgacgcaggccgatgtggatgccggtcaggtg
gacaacgctgcgacgaccacgggtacgccgccgtcgggtccgaaggtcaccgatgaggac
gacgtgacggtcccggggacccaggcgcccgagctcgagctgctcaagcgggtggcgtcg
gtcgacgacgtgaacggcaacggtctgacggacctgggcgacgagatcaactacgtgttc
gacctcgagaacaccgggaacgtgacgttgaccgacgtggcggtcgatgacccgctgttg
gcgggtctggggatcacggtcacgtgtgacccgacgacgctggcgccgggtgcgtcggtg
acgtgcacggctgatgagccgtacgtgatcacgcaggccgatgtggatgccggcacggtc
gagaacgtcgcgaccgcgacgggcacgcccccgtcgggtccggtggtcgagaccccggag
agccccacggtcacgccgttggacggcgagccggcgatcgagctggtgaagacggctgac
aagaccgatctggtggtgggggagacgatgacgtacacgttcgtcaccacgaacaccgga
aacgtcaccctgagcgatgtcgtcatcgccgagtctgcgttcacgggttcggggacggtg
tcggcgatcgactgtgacccgaccgcgccggcggttcttgcgccgggtgagtcgatggag
tgcactgcgacgtatgtggtgacgcaggccgatgtggatgccggtcaggtggacaacgca
gcgacgaccacgggtacgccgccgtcgggtccgaaggtcaccgatgaggacgacgtgacg
gtcccgggcacctcggagccggagctgtcgctcaacaagcgagtcagctcggtgtcggac
gtcaacgacaacggtctgacggacctgggcgacgagatcgagttcgtgttcgacctcgag
aacaccgggaacgtgacgctgaccgacgtggcggtcgatgacccgctgttggcgggtctg
gggatcacggtcacgtgtgacccgacgacgctggcgccgggtgcgtcggtgacgtgcacg
gccgatgagccgtacgtgatcacccaggccgacatggatgccggcacggtcgagaacacg
gccacctcgcacggcactccgccgacgggcccgcctgtcccgagcaaccccgacgagacg
gtgaccgagctcgacgacgagccggcgctggtcctcgacaagcgggtgacctcggtgacc
gacgtcgatggcgacggtcggacggacgagggcgacgagatcgcctacgccttcgacctg
acgaacaccggcaacgtcacgctcaccgagctcgtggtcgacgacccgatgctggaggcg
gccgggatcgcggtcacctgcccggtgacctcgctggcgccgtcggagacggtgacctgc
ctggcggacgaggcgtacgtcatcactgccgcggacgtcgatgcgggagcggtgcgcaac
accgcgacggcgggctacaccccgccgggacagcccccggtcgtcaccccgcccgactcg
gtcacgacgccgatcgagctcccggagccggacgtctcctccggttcggccggctctggc
ggtgggctgcccaacaccggcggaccgtcgctgctgctgatcggcggcgcagggatcagc
ctcctggccggcctggtgttggtgggacgcaacaggcgcaaggtggcctga
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