Nocardioides aromaticivorans: CFH99_05430
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Entry
CFH99_05430 CDS
T07236
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
naro
Nocardioides aromaticivorans
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naro03021
]
CFH99_05430
Transcription machinery [BR:
naro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFH99_05430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
Crp
DUF7343
HTH_3
KORA
HTH_37
DUF1492
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QSR25060
LinkDB
All DBs
Position
1129185..1130009
Genome browser
AA seq
274 aa
AA seq
DB search
MSIALEVEVPTIPSAHPEPALPSDERKARTAELLAQARETSGAEREALLEQVIVINIPVA
RTLAARYRNRGQSQDELEQVACLALTRAVQSFDPELGDDLLVFAVPTILGELKRHFRSAS
WVVRPPRRVQEIRPRITAMEAELTQELGRPPSLEELAEAVDAPVDEVEEAMACGDLAHAS
SLDEPVSETGSSLAELLPTVEPGFDHSEAVVLLGPACRKLKPRDRWILQMRFYEQMTQQQ
IADELGVTQVQVSRLLQRIFTDLRRSVLGTTRAA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcgcccttgaagttgaggtacccaccatcccgtcggcccatccggagccggca
ctgccttcggacgagcggaaggcccgcaccgcggagctgctcgcccaggcccgcgagacc
agcggcgcggagcgcgaggcgctcctcgagcaggtcatcgtgatcaacatcccggtcgcc
cgcacgctggccgcgcgctaccgcaaccggggccagagccaggacgagctcgagcaggtc
gcctgcctcgccctgacccgggccgtgcagtccttcgacccggagctcggcgacgacctg
ctggtcttcgccgtccccaccatcctcggtgagctgaagcggcacttccgctcggcgagc
tgggtggtgcggccgccgcgccgggtccaggagatccggccccggatcaccgccatggag
gccgagctcacccaggagctgggtcggccgccgtcgctcgaggagctcgccgaggccgtt
gacgccccggtggacgaggtcgaggaggccatggcctgtggcgacctcgcgcacgcgtcc
tcgctcgacgagccggtgtccgagaccggcagcagcctcgccgagctgctgcccacggtc
gagccgggcttcgaccacagcgaagccgtcgtcctgctcggtcctgcctgccgcaagctc
aagccacgcgaccgctggatcctgcagatgcgcttctacgagcagatgacgcagcagcag
atcgccgacgagctcggggtcacgcaggtgcaggtgtcccgcctcctgcagcggatcttc
acggatctgcgccggagcgtgctcggcaccacgcgcgcagcctag
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