Nocardioides aromaticivorans: CFH99_08745
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Entry
CFH99_08745 CDS
T07236
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
naro
Nocardioides aromaticivorans
Pathway
naro03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFH99_08745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naro03400
]
CFH99_08745
DNA repair and recombination proteins [BR:
naro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFH99_08745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
QSR25709
LinkDB
All DBs
Position
complement(1763727..1764683)
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AA seq
318 aa
AA seq
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MRAIWKGAVSFGLVSVPVKLYSATESHDVSFRQVHAKDGGRIKYQRVCSIDGEEVPYSDI
AKGFETEDGEMVILTDDDMANLPTTSSREIAVEKFVPVDQIDPMLFEKSYYLEPEGTGAK
PYALLRQALLDSKRMAVVTVALRQRTTTAVLRVRETEAGEVIVLQTMMWPDEIRQPDFKV
ETGEVKDAEVKMAQMLIETLSGDFDPSEFEDDYADAVNAVVKAKIEGGEVQRTETSAKTG
GEVVDLLAALQRSVEAAKTSRGESEPAPAKKATAKKSTATKAPAKKAAAKKTAAKKATTK
KATTKKAATKKAAAKKAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatctggaagggtgccgtctcgttcggcctggtcagcgtgccggtcaagctc
tacagcgcgaccgagagccacgacgtctcgttccggcaggtccacgccaaggacggtggc
cggatcaagtaccagcgggtgtgctcgatcgacggcgaggaggtgccgtactccgacatc
gccaagggcttcgagaccgaggacggcgagatggtcatcctcaccgacgacgacatggcc
aacctgccgacgacgtcctcgcgcgagatcgccgtggagaagttcgtcccggtcgaccag
atcgacccgatgctcttcgagaagagctactacctcgagcccgagggcaccggcgccaag
ccctacgccctgctgcgccaggcgctgctcgactcgaagcggatggcggtcgtgaccgtg
gccctgcgccagcggacgaccaccgcggtgctgcgggtccgcgagaccgaggccggcgag
gtgatcgtcctgcagacgatgatgtggcccgacgagatccgccagcccgacttcaaggtc
gagacgggcgaggtcaaggacgccgaggtcaagatggcgcagatgctcatcgagaccctg
tccggtgacttcgacccgtcggagttcgaggacgactacgccgatgccgtcaacgcggtg
gtcaaggcgaagatcgagggcggcgaggtccagcgcaccgagacgtcagccaagacgggc
ggcgaggtggtcgacctgctggccgcgctgcagcgctccgtggaggcggccaagaccagc
cgtggcgagagcgagcccgcgcccgcgaagaaggcgacggcgaagaagagcaccgccacg
aaggcaccggcgaagaaggccgcggccaagaagaccgctgcgaagaaggcaaccacgaag
aaggccaccacgaagaaggcggccacgaagaaggcggccgccaagaaggcgagctga
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