Nocardioides aromaticivorans: CFH99_10380
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Entry
CFH99_10380 CDS
T07236
Name
(GenBank) endonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
naro
Nocardioides aromaticivorans
Pathway
naro03030
DNA replication
naro03430
Mismatch repair
naro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFH99_10380
03430 Mismatch repair
CFH99_10380
03440 Homologous recombination
CFH99_10380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naro03032
]
CFH99_10380
03400 DNA repair and recombination proteins [BR:
naro03400
]
CFH99_10380
Enzymes [BR:
naro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFH99_10380
DNA replication proteins [BR:
naro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFH99_10380
DNA repair and recombination proteins [BR:
naro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFH99_10380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DEDDh_C
TMV_coat
Hemerythrin
Motif
Other DBs
NCBI-ProteinID:
QSR26031
UniProt:
A0ABX7PJA4
LinkDB
All DBs
Position
complement(2123913..2125625)
Genome browser
AA seq
570 aa
AA seq
DB search
MTSTAALPAPRWEEQRSFDELGRALRDVTFCVVDLETTGGSVGDGDRITEIGAVKVRGGE
VLGEFQTLVNPHTAIPAFIAVLTGITNRMVADAPSIRSALPAFLEFAAGSVLVAHNARFD
VGFLRHFAQEQDLVWPDFEVLDTVKLARHVVSRDEAPNHKLSSLARVFRASTTPNHRALE
DARATVDVLHGLMERLGGLGVHTLEELQGYNARVASASRRKRHLADTLPHAPGVYLFRDE
RERVLYVGTSRDLRRRVRSYFTASEKRTRIGQMVQLAASVTGIECATPLEAEVRELRLIA
EHKPPYNRRSRHPEKVTWLKLTREPWPRLSLVKRVLDDDADYVGPFSSRASAESSLAALH
EVFPIRQCNERFGRKPSRSRCALAEMDRCLAPCDGSVDEQSYGAVVRQLQDTLLRRPDDV
VDLVQARMSALAEQERFEEAAHHRDRLADFIRGSARTQRLAALTGCPEVVAARREDDGRW
AVHVVRHGRLAAAGVIPSGADALTWVDSLRLTAETVLPALGPTPAATAEETERILRWLEA
PGVRLVDVVGEWTCPVQGAARHVTLTTLAP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacggctgcactccccgccccgcggtgggaggagcagcgctcgttcgacgag
ctcgggcgagcgttgcgcgacgtcaccttctgcgtcgtcgacctggagacgaccggcgga
tcggtcggcgacggtgaccggatcaccgagatcggcgccgtcaaggtccgcggcggcgag
gtgctcggcgagttccagaccctcgtcaacccgcacaccgcgatcccggcgttcatcgcc
gtgctgacgggcatcaccaaccgcatggtcgccgacgcgccgtcgatccgctcggccctg
ccggcgttcctcgagttcgccgcgggcagcgtgctggtcgcgcacaacgcccgtttcgac
gtcggcttcctgcgccacttcgcgcaggagcaggacctggtgtggccggacttcgaggtc
ctcgacacggtcaagctcgcccgccacgtcgtcagccgcgacgaggcgcccaaccacaag
ctgtcatcgctcgcgcgcgtgttccgtgcgtcgacgacgcccaaccaccgagccctcgag
gacgcccgcgccaccgtcgacgtgctgcacgggctgatggagcggctcggtgggctcggg
gtgcacaccctcgaggagctgcagggctacaacgcgcgcgtcgcctcggcgtcgcgacgc
aagcggcacctcgccgacaccctcccccacgccccgggcgtctacctcttccgggacgag
cgcgagcgggtcctctacgtcggcacctcgcgcgacctgcgccgccgggtccgctcctac
ttcacggcctcggagaagcgcacccgcatcgggcagatggtccagctcgcggcctccgtg
accgggatcgagtgcgcgaccccgctcgaggctgaggtgcgcgagctgcggctgatcgcg
gagcacaagccgccgtacaaccgtcgctcgcggcacccggagaaggtcacctggctcaag
ctcacccgcgagccctggccccggctgtcgctcgtcaagcgggtgctcgacgacgacgcc
gactacgtcgggccgttctcctcccgcgcgagcgccgagagctcgctcgccgcgctgcac
gaggtcttcccgatccgtcagtgcaacgagcggttcggcaggaagccctcgcgctcccgc
tgcgcgctcgccgagatggaccgttgcctggcgccctgcgacggcagcgtcgacgagcag
tcgtacggcgccgtggtgcgccagctgcaggacaccctcctgcgccgccccgacgacgtg
gtcgacctcgtgcaggcccggatgtcggcgctggccgagcaggagcgcttcgaggaggcg
gcccaccaccgcgaccggctcgccgacttcatccgcggctcggcccggacgcagcgactc
gccgcgctgaccggctgtccggaggtcgtcgcagcgcgacgcgaggacgacggccgctgg
gcggtgcacgtcgtgcggcacggccggctggcagcggccggggtcatcccgtcgggcgcc
gacgcgctcacctgggtcgactcgctacggctcaccgccgagacggtgctccccgccctc
ggaccgacgcccgccgccacggcggaggagaccgagcggatcctgcgctggctcgaggcg
ccgggcgtgcgcctggtggacgtcgtcggcgagtggacctgcccggtgcagggtgccgcg
cgccacgtgacgctcactacgctggccccatga
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