Nocardioides aromaticivorans: CFH99_12585
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Entry
CFH99_12585 CDS
T07236
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
naro
Nocardioides aromaticivorans
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
naro03051
]
CFH99_12585 (pafA)
Enzymes [BR:
naro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CFH99_12585 (pafA)
Proteasome [BR:
naro03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CFH99_12585 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QSR26462
LinkDB
All DBs
Position
complement(2587138..2588499)
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVVDLVTHDKAGERVLEGLLLDAEQRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRAGEFSRLADVLIPFLVTRQVIVGAGKVTQTPRGTSYAVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDVTGRRKVRLANGREASALDIQAEYLTKARDFVDRRGIATPVI
ERSLDLWERTLKAVESDDLGLVDREIDWVIKWKLIDRYRAKHGLPMSHPRIAQLDLAYHD
IHRNRGLYYLLEKRGAVTRVTSDLKIFEAKSVPPQNTRARLRGEFIRKAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAYDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcgcatcttcggtatcgagaacgagtacggcgtcacctgcacgttccgcggc
cagcgccggctcagccccgacgaggtcgcgcgctacctgttccgcaaggtcgtcagctgg
ggacgcagcagcaacgtcttcctgcgcaacggtgcgcggctctacctcgacgtcggcagc
cacccggagtacgccaccccggagtgcgacgacgtggtcgacctggtcacccacgacaag
gcgggggagcgggtcctcgagggcctcctgctcgacgccgagcagcggctgcacgacgag
ggcatcgccggcgagatctacctgttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactacctggtcagcagggcaggcgagttcagccgtctcgccgacgtc
ctgatcccgttcctcgtcacccggcaggtgatcgtcggtgcgggcaaggtgacgcagacg
ccgcgcggcacgtcgtacgccgtcagccagcgcgcggagcacatctgggagggcgtctcc
agcgccaccacccgcagccgcccgatcatcaacacgcgcgacgagccgcacgcggacgcc
gagaagtaccgccgcctccacgtcatcgtcggcgactcgaacatgagcgagacgaccacg
atgctcaaggtcgcgtcgtgcgacctggtgctccggatgatcgaggagggcgtggtgatg
cgcgacctcacgatggagaacccgatcagggcgatccgcgagatctcccacgacgtcacc
ggcaggcgcaaggtccggctggccaacggccgcgaggcgagcgcgctcgacatccaggcc
gagtacctcaccaaggcacgcgacttcgttgaccgccgcggcatcgccactcccgtgatc
gagcgctcgctcgacctgtgggagcgcacgctcaaggcggtcgagtccgacgacctgggc
ctcgtcgaccgggagatcgactgggtcatcaagtggaagctgatcgaccgctaccgcgcg
aagcacggcctgccgatgagccacccccgcatcgcccagctcgacctcgcctaccacgac
atccaccgcaaccgcgggctctactacctcctggagaagcgcggcgccgtcacccgggtg
accagcgacctcaagatcttcgaggcgaagtcggtgccgccccagaacacccgcgcccga
ctgcgcggcgagttcatccgcaaggcgcaggagcgccggcgcgacttcacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgttctctgcaaggacccgttccgc
gcgtacgacgagcgggtccagcgcctgatcgacggcatgtag
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