Nocardioides aromaticivorans: CFH99_14195
Help
Entry
CFH99_14195 CDS
T07236
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
naro
Nocardioides aromaticivorans
Pathway
naro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFH99_14195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Sde0182_C
K319L-like_PKD
Rax2
DUF4625
Big_7
DUF5122
Big_13
Motif
Other DBs
NCBI-ProteinID:
QSR26776
LinkDB
All DBs
Position
2916920..2922580
Genome browser
AA seq
1886 aa
AA seq
DB search
MLDPAAGGRLAVRGQVPNLPNIGHARGARRLSRSQGPRDRGTCECGDVKHMCSTTTSRRQ
PVPGRLRRHIVRVLFPIIALAALPALAPIAPPAQAAAGAITFVDAASTAGNRTAHTVRVP
ASVRAGDVLLMALTTNSTASTIADPGAGWTEVAARDGDGIRSRLWTRTATAADVDANVTV
TTSASAKSVMTVAAYRSTGADPAVVGVAGGSNTAGTSHVAPAVTVADPGSWVVSVWAEKS
STDTTWTSPSGVTRRSSAAGTGTGKISGIWDDSAGAVPTGLAAARSATTSTTVSRTATYS
VVISPGNLPDNPPDAAFTASCSGLVCSFDASGSADPDGDALTYAWTFGDGSTGSGRTPEH
TYATAGPRTVTLTVSDGTNDDTATRQVAPDVAVTAGQVTFVAAASTAGNRPGHSVTIPAA
VEPGDRLVLFLVTNSTSSTIDGAPAGWDLLQSRDGNGIRGLAWTRSATAADAGRTVTVTG
SAYVKSVMTVAAYRSTGPAEVGAFALGGANAPASSHTAPATTATQANSWLVNLWSEKSTD
PTTWTLPAGTSSRSQATGTGTGKISGILGDSDGAVPVGPLAGRTATTSTTVSRSMMFSIV
LDPGVDGTGTNEPPVAEFSTGCAGLTCEFDAAHSFDVDKDPLTYSWQFGDGQTGTGVNPE
HTYATPGTRTVTLTVDDGHGHVDQATSSASAVPPNPAPGHTALVPDTPRTNQPTITTGEI
WDIEVVGNRVYVAGSFTSIRQPNNGATINQAYLAAYNWSTGQVDTTFRPTFTNGQVDAVE
ASPDGTKLYISGNFGTVNGLSRKAIARINPTTGAPIEGFTANANGKVNELAVTNSTVYAG
GRFSTINNVPRGALAAVDGVTGAVRTDFVNNITGGIGTNGELAVQRLKLTHDEGRLLVVH
TGRQVNGKDRYGIAIINTRTNKLTPWRTTLWEDNLQFVGGIQRIYGGDIAPDDSYFVVTS
GSGGDRPPINDTVIRYDLDDDDTDAQPTWISRHFDSVYSVAATEAGIYIGGHFQWAESAT
APVPWPGLDDVGYGTGQGLSAYALGDAVVKRFHLAALDPADGHALEWFAPSNSYEGDKHI
EATPRGLFVGGDGNTKGSYNVGRIAFFDFNNVPAQNGTQTVITGPIEGRIEPVDEEFEIT
GTATAASGIQRVEVEVMDRTSNRYLADDLTTWGSTATNTFDAVLDPGTGTSRTWRLPLTM
NANRELIVRARAVAGNGTADNTKAAKKFETFGTTDRTPTTSITGPSSPQSQLTFTITGTA
TDDFGVNGVSFTLRDTRGRYLQDDGTVSGTYNTFQVEPDVVGATSTTWSYEITVPFEDEW
WAQARSSDTAGQSSLDTADRRWIVTENGQAPTVSITQPASMVPPTTAQPVTVSPGSPITF
AGSANDDEALNEVSITLRNNSTGERLASDGSWGTGVIAGSYRVSPVNLDQASYNWSYTTP
FDLSPGSYSFTVTAEDQIGLGTPSSMQGRLTVNAQIPGDSPPNATITPTGTITGQQVLAL
NLAGAATDDKGVARVGIAIQDRDTSRYLQPGGTMAAAFATLDATLASPGATSTSWSLAVS
LPSQGDWAVTAYAYDTAGQQDPSTTGATSRYPIYPGDQPPVLNEALLNPLEGTEFLDGKI
FVSGRAEDDQAMQRVEVGIVNSLGQYMSSTGTFTSTTASWRTAFLNSPGTPGSNFSFTTP
VVPPGSYTVRVRAIDQHDFVSVVYERHVTVVHPPNNPPVASFTASCTRNVCTFDARGSTD
ENATALTYSWNFGNGTGSGPVATRTYTAANTYTVVLTARDEWGVTATATQTVTIAVPADN
HAPTPVLNAPACAGLSCNFSAVGSADPDPGDTITYRWDWGDATPASTASSTSHTFPAAGT
YTVSLTITDGWGAPATTTRVVTVATP
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccgccgccgggggccgcctcgccgtccgtgggcaggtgccgaacctgccc
aatatcggtcatgcccgaggcgcccgccgcttgtcacgatcgcagggccctcgggaccga
gggacatgcgagtgcggggacgtgaagcacatgtgttcaaccaccaccagtcggcgccaa
ccggtcccaggccgactacggcgacacatcgtcagggtgttgttccccatcatcgccctg
gcggccctccccgcactcgcgccaatcgcgccaccggcccaggcggccgccggagcaatc
accttcgtcgacgccgccagcacggcgggcaaccggaccgcccacacggtccgcgtgccc
gcgagcgttcgggccggcgacgtcctgctgatggcactcacgacgaactcgaccgcgagc
acgatcgccgaccccggcgccgggtggaccgaggtcgccgcgcgcgacggcgacggcatc
cgcagccggttgtggaccaggaccgccaccgcagccgacgtcgacgccaacgtcaccgtg
accacgagcgcctccgccaagtcggtgatgaccgtcgccgcctaccgcagcaccggtgcc
gacccggcggtggtgggtgtcgcgggcggctccaacacggccggcaccagccacgtcgcc
ccggcggtgacggtcgccgaccccggctcctgggtggtcagcgtctgggcggagaagtcg
tcgaccgacaccacctggacctcgccctccggcgtcacccggcgcagctcggcagcgggc
acggggacggggaagatcagcggcatctgggacgactcggccggcgccgtccccaccggg
ctcgcggccgcccgctccgcgaccaccagtacgacggtgtcgcgcacggcgacgtactcc
gtcgtcatcagcccggggaacctgccggacaacccgcccgacgccgcgttcacggcgagc
tgcagcggcttggtgtgctccttcgacgcctccggctccgcggaccccgacggcgacgcc
ctgacctatgcctggaccttcggggacggcagcacgggctccgggcggacccccgagcac
acgtacgccacggcgggcccacgcacggtcaccctcacggtgagtgacgggaccaacgac
gacaccgcgacgcggcaggtcgccccggacgtcgcggtgacggcgggacaggtgaccttc
gtcgccgccgccagcaccgccggcaaccggcccggccactcggtgacgatcccggccgcc
gtcgagccgggcgaccggctggtcctgttcctcgtcaccaactccacctccagcaccatc
gacggcgcgcccgccgggtgggacctgctgcagtcgcgcgacggcaacggcatccgtggg
ctggcatggacccgcagcgcgaccgccgccgacgccgggcggaccgtcacggtcaccggc
agcgcctacgtgaagtcggtgatgaccgtcgccgcctatcggagcaccggaccggcggag
gtcggagcgttcgcgctggggggtgcgaacgccccggcctccagccacaccgcgcccgcg
accaccgccacgcaggccaactcgtggctggtgaacctgtggagcgagaagtccacggat
ccgacgacctggaccctgccggccgggacgtcgagccgcagccaggcgaccggcaccggg
accgggaagatcagcgggatcctcggtgacagcgacggcgccgtccccgtcggtccgctg
gccggccgcacggccaccaccagcaccacggtctcgcggtcgatgatgttctcgatcgtg
ctcgacccgggcgtcgacggcaccgggaccaacgagcctcccgtggcggagttctcgacc
ggctgcgccgggctcacctgcgagttcgacgccgcgcactccttcgacgtcgacaaggac
ccgctgacctacagctggcagttcggtgacggccagaccgggacgggcgtcaaccccgag
cacacctacgccacccccgggacccggacggtgacgttgaccgtcgacgacggccatggc
cacgtcgaccaggccacgagcagcgcgagcgccgtccccccgaaccccgcgcccggccac
accgcgctcgtccccgacaccccgcgcaccaaccagccgacgatcacgaccggcgagatc
tgggacatcgaggtcgtcggcaaccgggtgtacgtcgccgggtcgttcacctccatccgc
cagcccaacaacggcgcgacgatcaaccaggcctacctggcggcgtacaactggagcacg
gggcaggtcgacacgaccttccggccgaccttcaccaacggacaggtcgacgccgtggag
gcctcgcccgacggcaccaagctgtacatctccggcaacttcgggaccgtcaacgggctg
agccgcaaggcgatcgcgcggatcaacccgaccacgggcgcgccgatcgagggcttcacc
gccaacgccaacggcaaggtgaacgagctggccgtcaccaactcgacggtgtacgccggc
gggcggttcagcacgatcaacaacgtgccgcggggcgcgctcgccgccgtcgacggcgtc
acgggtgcggtccgcacggacttcgtcaacaacatcaccggcggcatcggcaccaacggc
gagctcgccgtgcaacgactcaagctgacccacgacgagggacgcctgctggtcgtccac
accggtcggcaggtcaacggcaaggaccggtacggcatcgcgatcatcaacacccgcacc
aacaagctgacgccgtggaggacgacgctgtgggaggacaacctccagttcgtcggcggc
atccagcgcatctacggcggtgacatcgcacccgacgactcgtacttcgtcgtgaccagc
ggctccggcggcgaccgcccgccgatcaacgacaccgtcatccgctacgacctcgacgac
gacgacacagacgcccagcccacctggatctcccggcacttcgactcggtgtactccgtc
gccgcgaccgaggccggcatctacatcggtggccacttccagtgggccgagtcggcgacg
gcaccggtcccgtggccgggcctcgacgacgtcggctacggcaccggccagggcctgtcg
gcgtacgcactcggcgacgcggtcgtgaagcgcttccacctcgctgcgctcgaccccgcg
gacggtcacgcactcgagtggttcgcaccgtccaactcctacgaaggcgacaagcacatc
gaggccaccccgcgcggcctgttcgtcggcggcgacggcaacacgaagggcagctacaac
gtcgggcgcatcgcgttcttcgacttcaacaacgtgccggcccagaacggcacccagacg
gtgatcaccggcccaatcgaggggcggatcgagccggtggacgaggagttcgagatcacc
gggacggcgacggccgcgagcgggatccagcgggtcgaggtcgaggtgatggaccgcacg
tctaaccgctacctcgccgacgacctgacgacgtggggctccacggcgacgaacaccttc
gacgccgtcctcgaccccggaaccggtacgtcgcgcacgtggcgcctgccgctcaccatg
aacgccaaccgcgagctcatcgtgcgggcgagggcggtggccggcaacggcaccgccgac
aacaccaaggcggccaagaagttcgagacgttcggcaccaccgaccggacgccgaccacc
agcatcacgggaccgtccagcccgcagagccagctcacgttcaccatcaccggcacggca
accgacgacttcggcgtcaacggcgtcagcttcacgctgcgcgacacccgcggtcgctac
ctgcaggacgacgggacggtgtccggcacctacaacaccttccaggtcgagcccgacgtc
gtcggagcgacgagcaccacctggtcctacgagatcaccgtgccgttcgaggacgagtgg
tgggcgcaggcgaggtcgagcgacacggccggccagtcgtcgctcgacaccgcggaccgg
cggtggatcgtgaccgagaacggccaggcgccgacggtctcgatcacccagccggccagc
atggtgccgcccacgaccgcacaaccggtcacggtgagccccggcagcccgatcaccttc
gcgggctccgccaacgacgacgaggcgctcaacgaggtctcgatcacgctgcgcaacaac
tccaccggggagcggctcgcctccgacggctcctggggcaccggcgtgatcgccggctcc
taccgggtctcgccggtcaacctcgaccaggcgagctacaactggagctacacgacaccg
ttcgacctcagtcccggcagctactcgttcacggtcaccgccgaggaccagatcgggctg
ggcacgccgtccagcatgcagggccgactcaccgtcaacgcccagatcccgggcgacagc
ccacccaacgcgacgatcacgccgacggggacgatcaccggtcagcaggtgctcgcactg
aacctcgccggcgccgcgaccgacgacaagggcgtcgcccgggtcggcatcgcgatccag
gaccgggacaccagccgctacctgcagcccggaggcaccatggccgccgcgttcgccacg
ctcgacgccacgctggccagccccggtgccaccagcacgtcctggagcctggcggtctcc
ctgcccagccagggcgactgggcggtgacggcctacgcctacgacaccgccgggcagcag
gacccgtcgacgaccggcgccacctcgcgctacccgatctaccccggcgaccagcctccg
gtgctcaacgaggcactgctcaaccccctcgagggcaccgagttcctcgacggcaagatc
ttcgtgagcggccgcgccgaggacgaccaggccatgcagcgggtcgaggtcgggatcgtc
aactcgctcggccagtacatgagctccaccgggaccttcaccagcaccaccgcgagctgg
cgtaccgccttcctcaacagtcccgggacgcccggctccaacttctccttcacgacgccc
gtcgtcccgccgggcagctacacggtgcgggtgcgggccatcgaccagcacgacttcgtg
agcgtggtgtacgagcgccacgtgaccgtggtccatccgcccaacaacccgccggtggcg
agcttcaccgccagctgcacccgcaacgtctgcaccttcgacgcccggggctccaccgac
gagaacgccaccgccctgacgtactcctggaacttcgggaacggcaccgggagcggaccg
gtcgcgacccggacctacacggcggccaacacctacacggtggtcctcacggcccgtgac
gaatggggggtcaccgcgacggccacgcagaccgtcaccatcgcggtgccggcggacaac
cacgcgccgaccccggtgctgaacgcgcccgcgtgcgcgggcctgtcctgcaacttctcg
gccgtgggctcggcggacccggatcccggcgacacgatcacctaccgctgggactggggc
gacgcgacgccggcctccaccgcctcgtccacctcgcacacgttcccggccgccgggacc
tacaccgtctcgctgaccatcaccgacgggtggggagctccggccaccacgaccagggtc
gtgaccgtcgccaccccgtga
DBGET
integrated database retrieval system
