KEGG   Nocardioides aromaticivorans: CFH99_17100
Entry
CFH99_17100       CDS       T07236                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
naro  Nocardioides aromaticivorans
Pathway
naro02024  Quorum sensing
naro03060  Protein export
naro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:naro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CFH99_17100
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CFH99_17100
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFH99_17100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:naro02044]
    CFH99_17100
Enzymes [BR:naro01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CFH99_17100
Secretion system [BR:naro02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CFH99_17100
  Eukaryotic Sec-SRP protein
   CFH99_17100
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 cobW ArsA_ATPase nSTAND3 Zeta_toxin AAA_31 APS_kinase AAA_33 ParA NPHP3_N AAA_24 NACHT AAA_16 AAA_25 Thymidylate_kin AAA_18 MobB TsaE
Other DBs
NCBI-ProteinID: QSR27341
LinkDB
Position
complement(3550454..3552172)
AA seq 572 aa
MALPTTAQAPSASAVPSNVHRRRQARGPWRLRSVFEDLTSTDDSDEDATLLFATLSDRLS
ATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVKDFVAAVKERARGEEVSQALNP
AQQVVKIVNEELIEILGGETRRLRYAKTGPTVIMLAGLQGAGKTTLAAKLALWLKDQGKA
PLLVACDLQRPNAVQQLQVNGEKVGVPVFAPEPGNGTGDPVSVAKASIEEAKRKLHDVVI
VDTAGRLGVDAEMMAQAAGIRDAVQPDEVLFVVDAMIGQDALTTAQAFLDGVGYDGVVLT
KLDGDARGGAALSIRQVTGRPVMFASTGEKLTDFDVFHPDRMASRILDMGDVLTLIEQAE
KAFDQEEALRAAEKLTGGDFTLDDFLAQMQQLKKLGSMTSILKMLPGMGQIRDQIENFDE
REIDRVEAIIRSMTPAERANPKIIDGSRRSRIAKGSGRTVSDVNGLVDRFFEARKMMMQM
ARGGGMPGMPGMPGMGGPGGGKRVSAKQKAKQGKGKGARKSGNPAKAAQEAAAAKAKAAE
AKPNPFGIGQDIDYEAAAENLQLPKDFSKFLK
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggcactcccgaccaccgcgcaggccccgagcgccagcgcagtaccctcgaacgtccac
cgcagacgtcaggcccgtgggccgtggcggctacgatcggtgttcgaagacctcacttct
accgacgattccgacgaggacgcaacgctcttgttcgccacactgtccgaccgcctgtcc
gcgaccttcaagaacctccgcggcaagggccggctctccgaggccgacatcgacgcgacc
gcccgcgagatccggatcgccctgctcgaggccgacgtcgcgctgcccgttgtcaaggac
ttcgtggccgcggtcaaggagcgcgcccgcggcgaggaggtcagccaggcgctgaacccc
gcccagcaggtcgtcaagatcgtcaacgaggagctcatcgagatcctcggcggcgagacc
cgccggctgcgctacgccaagaccggcccgacggtcatcatgctcgccggcctccagggt
gccggcaagaccacgctcgcggccaagctcgcgctgtggctcaaggaccagggcaaggcg
ccgctgctggtggcctgtgacctgcagcgtcccaacgcggtccagcagctccaggtcaac
ggcgagaaggtcggcgtccccgtcttcgccccggagccgggcaacggcacgggcgacccg
gtgtcggtcgccaaggcgtcgatcgaggaggccaagcgcaagctccacgacgtcgtcatc
gtcgacaccgccggccgcctcggcgtcgacgccgagatgatggcgcaggccgcgggcatc
cgcgacgccgtgcagcctgacgaggtcctcttcgtcgtcgacgccatgatcggccaggac
gccctcaccacggcgcaggccttcctcgacggcgtcgggtacgacggcgtggtgctcacc
aagctcgacggtgacgcccgcggtggtgccgccctgtcgatccgccaggtcaccggtcga
ccggtcatgttcgcctccaccggcgagaagctcaccgacttcgacgtcttccaccccgac
cggatggcctcgcgcatcctcgacatgggcgacgtgctcaccctgatcgagcaggccgag
aaggcgttcgaccaggaggaggcgctccgcgcggcggagaagctgaccggtggcgacttc
acgctcgacgacttcctggcccagatgcagcagctgaagaagctgggctcgatgaccagc
atcctcaagatgctcccgggcatgggccagatccgcgaccagatcgagaacttcgacgag
cgcgagatcgaccgggtcgaggcgatcatccgctcgatgaccccggccgagcgcgccaac
ccgaagatcatcgacggctcgcgccgctcccgcatcgccaagggctccggccgcacggtg
tccgacgtcaacggcctcgtcgaccgcttcttcgaggcgcggaagatgatgatgcagatg
gcccgcggcggcgggatgcccggaatgccgggcatgcccggcatgggcggtcccggtggc
ggcaagcgggtcagcgccaagcagaaggccaagcagggcaagggcaagggcgcgcgcaag
tcgggcaacccggccaaggccgcgcaggaggccgccgccgcgaaggcgaaggccgccgag
gcgaagccgaacccgttcggcatcggccaggacatcgactacgaggccgcggcggagaac
ctgcagctgccgaaggacttctcgaagttcctgaagtga

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