Nocardioides aromaticivorans: CFH99_17310
Help
Entry
CFH99_17310 CDS
T07236
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
naro
Nocardioides aromaticivorans
Pathway
naro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFH99_17310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
naro03000
]
CFH99_17310
03400 DNA repair and recombination proteins [BR:
naro03400
]
CFH99_17310
Enzymes [BR:
naro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CFH99_17310
Transcription factors [BR:
naro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CFH99_17310
DNA repair and recombination proteins [BR:
naro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFH99_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF7437
HHH
Motif
Other DBs
NCBI-ProteinID:
QSR27383
LinkDB
All DBs
Position
complement(3592406..3593911)
Genome browser
AA seq
501 aa
AA seq
DB search
METTSPQVDEAAQLEFDRCYTAVQSRDRRFDGVFYTAVRTTGIYCRPSCPARTPAPANVT
FHRTAAAAQGAGYRACKRCLPDATPGSPDWNVAATVAGRAMRLISDGVVDREGVEGLATR
LGYTSRHLSRLLTAELGAGPLALARTQRAQTARALVESTDLTLTDVAFAAGFSSVRQFND
TMQEVYAASPSELRGRRASSGASAGGIQLRIAVRTPFRGSALLRFLADRAIPGIEVAEVD
ADGSGWYARTLDLPHGPGTARVELADVAGAGTSYVPLRLALEDLRDTAAAVARMRVLLDA
DADPVAVDAHLGADPALAPLVEARPGLRVPGHVAGSEIAVRAVLGQQVTVVAARTAAARL
VASHGRPVTTTVDGLTHLFPDAATVAAMDPTDFRMPRARGRALIGLAAALADGDLVLDRG
PDRGEVRERLLALPGIGPWTADYIALRALGHPDIWLPTDVGVRNGLAALPAGAAADPATW
APWRSYALLHLWTSLSASLEG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacgagcccgcaggtcgacgaggcggcgcagctggagttcgaccgctgctac
acggccgtccagtcgcgcgaccgccgcttcgacggcgtcttctacaccgcggtccgcacc
acgggcatctactgccggccctcgtgcccggcccgcacgccggccccggccaacgtgacc
ttccaccgcaccgccgcggccgcccagggcgccggctaccgcgcctgcaagcgctgcctg
cccgacgccacgcccggcagccccgactggaacgtcgccgccacggtcgctggtcgcgcg
atgcggctgatcagcgacggcgtcgtcgaccgtgagggcgtggagggactcgcgacccgg
ctcggctacacctcgcgccacctctcgcggctgctgacggccgagctcggtgccggcccg
ctcgccctcgcgcgcacgcagcgcgcccagaccgcgcgggcgctcgtcgagagcaccgac
ctcaccctgaccgatgtcgcgttcgcggccgggttctccagcgtgcggcagttcaacgac
accatgcaggaggtgtacgccgcctcgccgagcgagctccgcggccgccgcgcctccagc
ggggcgtcggcaggcggcatccagctgcggatcgccgtgcgcacgcccttccgcgggagt
gcgctgctgcgcttcctggccgaccgggcgatccccggcatcgaggtcgcggaggtcgac
gcggacggctccggctggtacgcccgcacgctcgacctgccgcacggaccggggaccgcg
cgggtcgagctcgcggacgtggcgggcgccgggacgtcgtacgtcccgctgcggctggcg
ctggaggacctgcgcgacaccgccgcggccgtggcgcggatgcgtgtgctgctggatgcc
gatgccgacccggtggcggtcgacgcgcacctcggcgccgaccccgcgctcgccccgctg
gtcgaggccaggccggggctgcgcgtgccgggacatgtcgccggcagcgagatcgcggtg
cgggccgtgctcggacagcaggtcaccgtcgttgcggcgcgcaccgccgcggcccggctg
gtcgcttcccacggcaggccggtgacgacgaccgtcgacggcctgacccacctgttcccc
gacgccgccacggtcgccgcgatggaccccaccgacttccggatgccgcgcgcccggggc
cgggcactgatcggcctggccgcggccctcgccgacggcgacctcgtcctcgaccgcggg
cccgatcggggcgaggtccgcgagcggctgctggcgctgccgggcatcggcccctggacg
gccgactacatcgcgctgcgtgcgctcggccaccccgacatctggctgcccactgacgtc
ggcgtccgcaacggcctggccgcgctgccggccggtgccgccgccgatcccgccacctgg
gcgccctggcgctcctacgccctgctgcacctgtggacctcgttgtccgcatcactggaa
ggatga
DBGET
integrated database retrieval system
