Nocardioides aromaticivorans: CFH99_19725
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Entry
CFH99_19725 CDS
T07236
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
naro
Nocardioides aromaticivorans
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naro03016
]
CFH99_19725
Enzymes [BR:
naro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CFH99_19725
Transfer RNA biogenesis [BR:
naro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFH99_19725
Prokaryotic type
CFH99_19725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QSR27858
LinkDB
All DBs
Position
complement(4139774..4140634)
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AA seq
286 aa
AA seq
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MRLRIDLAYDGGDFRGWAAQPGLRTVQGELTTALTTVLRVPEGSLQVTCAGRTDAGVHAR
GQVVHVDVPEDPEEGSPAAARYLTQLDVLVRRVNGFLPRDVRVRRITPAPEGFDARFAAL
WRRYAYRIVDDPARVDPLTRNHVLAWPRELDVAAMDEAAASLVGLHDFAAFCKQREGATT
IRTLLAFGWTRSDDGLLTGHVQADAFCHSMVRALVGCMVAIGEGRKDPAWAREILTGRRR
DPGVVVVAAHGLTLEEVAYPADADLAARVELTSARRTGVGESGDHE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgcggatcgacctcgcctacgacggcggagacttccgtggctgggcggcccaa
ccgggcctgcggaccgtgcagggcgagctgacgaccgcgctcaccaccgtgctgcgggtc
cccgaggggtcgctccaggtgacctgcgccggccgcaccgatgcgggcgtgcacgcccgc
ggccaggtcgtccacgtcgacgtaccggaggacccggaggagggctcgccggcggcggcg
cgctatctcacccagctcgacgtgctcgtccgacgggtcaacggcttcctgccccgcgac
gtccgggtacgccgcatcacgcccgcgccggagggcttcgacgcgcggttcgccgccctg
tggcgccgctacgcctaccggatcgtcgacgacccggcccgtgtcgacccgctgacccgc
aaccacgtgctcgcgtggccgcgcgagctggacgtggcggcgatggacgaggccgccgcg
tcgctggtcggcctccacgacttcgccgccttctgcaagcagcgcgagggcgcgacgacg
atccgcacgctgctcgccttcggctggacccggtccgacgacggcctgctgaccggccac
gtgcaggccgacgcgttctgccactcgatggtgcgcgcgctggtgggctgcatggtcgcg
atcggggaggggcgcaaggaccccgcctgggcgcgggagatcctcaccggccggcgccgg
gacccgggcgtggtggtcgtcgctgcccacgggctcacgctggaggaggtcgcctacccg
gccgacgccgacctggccgcccgggtggagctcacgtcggcgcgtcgtaccggcgtcggg
gagagcggggaccacgagtga
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